RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 CPA3P15088 417 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 IMPDH1P20839 514 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 ITGA3P26006 1051 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 PTX3P26022 381 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 HMOX2P30519 316 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 TSFMP43897 325 aaKnown RBP5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 KRT6CP48668 564 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 CCL11P51671 97 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 PGDP52209 483 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 PLA2G16P53816 162 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 PRKAA2P54646 552 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 MTTPP55157 894 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 PKNOX1P55347 436 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 MAT1AQ00266 395 aaKnown RBP5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 CLCQ05315 142 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 LCP2Q13094 533 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 AIMP2Q13155 320 aaKnown RBP5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 ABRAXAS2Q15018 415 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZRSR2Q15696 482 aaKnown RBP5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 SYT16Q17RD7 645 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 AP5B1Q2VPB7 878 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 GGTA1PQ4G0N0 100 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 LACTB2Q53H82 288 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 VWA2Q5GFL6 755 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 CEP85LQ5SZL2 805 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 KHDRBS2Q5VWX1 349 aaKnown RBP5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 FRG2Q64ET8 278 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 LRIG3Q6UXM1 1119 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 GPRIN3Q6ZVF9 776 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 PRSS41Q7RTY9 318 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 PAGE2Q7Z2X7 111 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 PPP1R32Q7Z5V6 425 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 TRABD2AQ86V40 505 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 HPS6Q86YV9 775 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 APLFQ8IW19 511 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZC3H7AQ8IWR0 971 aaKnown RBP5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 LAS2Q8IYD9 372 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 ARHGEF39Q8N4T4 335 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 AFAP1L2Q8N4X5 818 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 CCNYL1Q8N7R7 359 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 AMER3Q8N944 861 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 L3MBTL4Q8NA19 623 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 C7orf57Q8NEG2 295 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR7G3Q8NG95 312 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 HUS1BQ8NHY5 278 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 PPP1R14CQ8TAE6 165 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 TRPC4APQ8TEL6 797 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 CREB3L4Q8TEY5 395 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZNF483Q8TF39 744 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 MZB1Q8WU39 189 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 SLC39A7Q92504 469 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 TM9SF4Q92544 642 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 TTC9Q92623 222 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 RGMAQ96B86 450 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 TBC1D20Q96BZ9 403 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 MS4A6EQ96DS6 147 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 L3HYPDHQ96EM0 354 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 MOCOSQ96EN8 888 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 PEX11GQ96HA9 241 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 FRG2BQ96QU4 278 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 SERINC2Q96SA4 455 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 SERPINI1Q99574 410 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 SPSB2Q99619 263 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 TBCDQ9BTW9 1192 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 SLC25A23Q9BV35 468 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 NTMT1Q9BV86 223 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 TMEM109Q9BVC6 243 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 NPLQ9BXD5 320 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 C1QTNF3Q9BXJ4 246 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 RBCK1Q9BYM8 510 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 SLC29A3Q9BZD2 475 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 ATP13A2Q9NQ11 1180 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 DMRT3Q9NQL9 472 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 SLC22A11Q9NSA0 550 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 RIC8BQ9NVN3 520 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 GPR83Q9NYM4 423 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 AHSPQ9NZD4 102 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 TRPS1Q9UHF7 1281 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 FBXL4Q9UKA2 621 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 MRPS2Q9Y399 296 aaKnown RBP5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 TSC22D4Q9Y3Q8 395 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 ASB1Q9Y576 335 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 HEMK1Q9Y5R4 338 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 URB1O60287 2271 aaKnown RBP5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 AKAP13Q12802 2813 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 A0A0G2JN53 185 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 BLACEA4D250 179 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 A6NL46 340 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 MAGEB17A8MXT2 336 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 FOXE1O00358 373 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR7A17O14581 309 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 CHST10O43529 356 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 DYRK3O43781 588 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 DLX3O60479 287 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 PLIN3O60664 434 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 PRMT3O60678 531 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 B4GALT2O60909 372 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 CNOT3O75175 753 aaKnown RBP5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 ALOX12BO75342 701 aa5.1□□□□□ -1.59
HMGB1P40-201ENST00000525121 GUCY1B2O75343 617 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms