RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 C16orf89Q6UX73 402 aa6.55□□□□□ -1.36
NEDD8-203ENST00000524927 CPOQ8IVL8 374 aa6.55□□□□□ -1.36
NEDD8-203ENST00000524927 NAXEQ8NCW5 288 aa6.55□□□□□ -1.36
NEDD8-203ENST00000524927 OR2Y1Q8NGV0 311 aa6.55□□□□□ -1.36
NEDD8-203ENST00000524927 DQX1Q8TE96 717 aaKnown RBP6.55□□□□□ -1.36
NEDD8-203ENST00000524927 IRGQQ8WZA9 623 aa6.55□□□□□ -1.36
NEDD8-203ENST00000524927 PTERQ96BW5 349 aa6.55□□□□□ -1.36
NEDD8-203ENST00000524927 JAKMIP1Q96N16 626 aaKnown RBP6.55□□□□□ -1.36
NEDD8-203ENST00000524927 RPRD1AQ96P16 312 aaPredicted RBP6.55□□□□□ -1.36
NEDD8-203ENST00000524927 OR2M4Q96R27 311 aa6.55□□□□□ -1.36
NEDD8-203ENST00000524927 FSD1LQ9BXM9 530 aa6.55□□□□□ -1.36
NEDD8-203ENST00000524927 BEX2Q9BXY8 128 aa6.55□□□□□ -1.36
NEDD8-203ENST00000524927 RAB33BQ9H082 229 aa6.55□□□□□ -1.36
NEDD8-203ENST00000524927 MRPL44Q9H9J2 332 aaKnown RBP6.55□□□□□ -1.36
NEDD8-203ENST00000524927 PHPT1Q9NRX4 125 aaPredicted RBP6.55□□□□□ -1.36
NEDD8-203ENST00000524927 PTGFRNQ9P2B2 879 aa6.55□□□□□ -1.36
NEDD8-203ENST00000524927 ZNF69Q9UC07 566 aa6.55□□□□□ -1.36
NEDD8-203ENST00000524927 CNOT8Q9UFF9 292 aaKnown RBP6.55□□□□□ -1.36
NEDD8-203ENST00000524927 SLC12A6Q9UHW9 1150 aa6.55□□□□□ -1.36
NEDD8-203ENST00000524927 FBXL4Q9UKA2 621 aa6.55□□□□□ -1.36
NEDD8-203ENST00000524927 SLC17A4Q9Y2C5 497 aa6.55□□□□□ -1.36
NEDD8-203ENST00000524927 A0A087X1B8 175 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 CXorf51AA0A1B0GTR3 108 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 A0A1B0GVC2 190 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 OR5K4A6NMS3 321 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 XPO1O14980 1071 aaKnown RBP6.54□□□□□ -1.36
NEDD8-203ENST00000524927 EML2O95834 649 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 GSRP00390 522 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 IGHDP01880 384 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 RHOCP08134 193 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 ZNF30P17039 623 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 AMD1P17707 334 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 CXCR5P32302 372 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 PRPHP41219 470 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 CAPZBP47756 277 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 AP3M2P53677 418 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 CDH4P55283 916 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 RPL15P61313 204 aaKnown RBP6.54□□□□□ -1.36
NEDD8-203ENST00000524927 ALCAMQ13740 583 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 ANKRD1Q15327 319 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 SNRNP35Q16560 246 aaKnown RBP6.54□□□□□ -1.36
NEDD8-203ENST00000524927 AARS2Q5JTZ9 985 aaKnown RBP6.54□□□□□ -1.36
NEDD8-203ENST00000524927 FAM92BQ6ZTR7 304 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 SETD3Q86TU7 594 aaPredicted RBP6.54□□□□□ -1.36
NEDD8-203ENST00000524927 CCDC71Q8IV32 467 aaPredicted RBP6.54□□□□□ -1.36
NEDD8-203ENST00000524927 CHERPQ8IWX8 916 aaKnown RBP6.54□□□□□ -1.36
NEDD8-203ENST00000524927 GHDCQ8N2G8 530 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 ATP6V0D2Q8N8Y2 350 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 BEND2Q8NDZ0 799 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 OR52L2PQ8NGH6 319 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 OR6K2Q8NGY2 324 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 HCAR2Q8TDS4 363 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 ZNF501Q96CX3 271 aaPredicted RBP6.54□□□□□ -1.36
NEDD8-203ENST00000524927 THOC3Q96J01 351 aaKnown RBP6.54□□□□□ -1.36
NEDD8-203ENST00000524927 MPP4Q96JB8 637 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 SIGLEC12Q96PQ1 595 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 PLIN2Q99541 437 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 TM6SF2Q9BZW4 377 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 KCNK9Q9NPC2 374 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 TMEM160Q9NX00 188 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 DNAJC16Q9Y2G8 782 aa6.54□□□□□ -1.36
NEDD8-203ENST00000524927 PTRH2Q9Y3E5 179 aaKnown RBP6.54□□□□□ -1.36
NEDD8-203ENST00000524927 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.54□□□□□ -1.36
NEDD8-203ENST00000524927 NUP210LQ5VU65 1888 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 IGHV5-51A0A0C4DH38 117 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 AGAP5A6NIR3 686 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 EPB41L2O43491 1005 aaKnown RBP6.53□□□□□ -1.36
NEDD8-203ENST00000524927 EXOC3O60645 756 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 ZMPSTE24O75844 475 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 RECQL5O94762 991 aaPredicted RBP6.53□□□□□ -1.36
NEDD8-203ENST00000524927 VENTXO95231 258 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 RPN1P04843 607 aaKnown RBP6.53□□□□□ -1.36
NEDD8-203ENST00000524927 ELFN1P0C7U0 828 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 GALNSP34059 522 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 COMPP49747 757 aaPredicted RBP6.53□□□□□ -1.36
NEDD8-203ENST00000524927 FAM3BP58499 235 aaPredicted RBP6.53□□□□□ -1.36
NEDD8-203ENST00000524927 SNRPD1P62314 119 aaKnown RBP6.53□□□□□ -1.36
NEDD8-203ENST00000524927 CYP24A1Q07973 514 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 OLIG2Q13516 323 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 IL17AQ16552 155 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 C5orf22Q49AR2 442 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 HECTD2Q5U5R9 776 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 ARHGAP17Q68EM7 881 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 WDR93Q6P2C0 686 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 TMEM26Q6ZUK4 368 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 C3orf56Q8N813 242 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 OR2AP1Q8NGE2 309 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 SLC9A6Q92581 669 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 PERPQ96FX8 193 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 PPM1MQ96MI6 270 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 TRIM51Q9BSJ1 452 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 CYP3A43Q9HB55 503 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 SLC13A4Q9UKG4 626 aa6.53□□□□□ -1.36
NEDD8-203ENST00000524927 MRPS2Q9Y399 296 aaKnown RBP6.53□□□□□ -1.36
NEDD8-203ENST00000524927 A0A0D9SEW6 157 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 FAM90A20PA6NIJ5 464 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 NPIPA5E9PKD4 350 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 STX16-NPEPL1H3BU86 382 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 TULP2O00295 520 aa6.52□□□□□ -1.37
NEDD8-203ENST00000524927 STX16O14662 325 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms