RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	PIWIL1	Q96J94	861 aa	Known RBP	4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	PRICKLE1	Q96MT3	831 aa	Predicted RBP	4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	FEV	Q99581	238 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	ZBTB18	Q99592	522 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	RAD9A	Q99638	391 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	BCL7B	Q9BQE9	202 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	PIGQ	Q9BRB3	760 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	PCGF1	Q9BSM1	259 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	THAP2	Q9H0W7	228 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	EHD1	Q9H4M9	534 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	VCPKMT	Q9H867	229 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	RAB9B	Q9NP90	201 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	MYNN	Q9NPC7	610 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	FAM114A2	Q9NRY5	505 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	CHRNA9	Q9UGM1	479 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	LAMB1	P07942	1786 aa		4.06	□□□□□ -1.76
PCM1-223	ENST00000524356	PTPRZ1	P23471	2315 aa	Predicted RBP	4.06	□□□□□ -1.76
PCM1-223	ENST00000524356		A0A1W2PPQ1	181 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	CXorf65	A6NEN9	183 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	MFSD2B	A6NFX1	497 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	DDTL	A6NHG4	134 aa	Predicted RBP	4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	NCF1B	A6NI72	391 aa	Predicted RBP	4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	NCF1C	A8MVU1	366 aa	Predicted RBP	4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	TTC34	A8MYJ7	566 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	XPO1	O14980	1071 aa	Known RBP	4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	CASC3	O15234	703 aa	Known RBP	4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	TEX28	O15482	410 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	RNF113A	O15541	343 aa	Known RBP	4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	PLPP2	O43688	288 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	TLX2	O43763	284 aa	Predicted RBP	4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	ATP9A	O75110	1047 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	ATP2C2	O75185	946 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	ZNF217	O75362	1048 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	TOM1L1	O75674	476 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	SURF6	O75683	361 aa	Known RBP	4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	ANKRD34C	P0C6C1	535 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	SPP1	P10451	314 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	MPZ	P25189	248 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	ALDH4A1	P30038	563 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	ZNF75D	P51815	510 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	CNN1	P51911	297 aa	Known RBP	4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	PRRX1	P54821	245 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	MTTP	P55157	894 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	CFHR3	Q02985	330 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	PPP1R8	Q12972	351 aa	Known RBP	4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	GALNT3	Q14435	633 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	NFATC4	Q14934	902 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	EFTUD2	Q15029	972 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	DPYSL2	Q16555	572 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	HADH	Q16836	314 aa	Known RBP	4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	PLK5	Q496M5	336 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	VWA5B1	Q5TIE3	1220 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	TMEM268	Q5VZI3	342 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	FIGLA	Q6QHK4	219 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	RTN4RL2	Q86UN3	420 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	SLC22A9	Q8IVM8	553 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	KLHDC8A	Q8IYD2	350 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	OR52N4	Q8NGI2	321 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	OR52B4	Q8NGK2	314 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	OR8J1	Q8NGP2	316 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	OR2T3	Q8NH03	318 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	HDAC7	Q8WUI4	952 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	FAM151A	Q8WW52	585 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	CKAP2	Q8WWK9	683 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	RAPGEF5	Q92565	580 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	ESAM	Q96AP7	390 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	FAM210A	Q96ND0	272 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	PLIN2	Q99541	437 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	SLC7A5P2	Q9GIP4	190 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	SIRPD	Q9H106	197 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	NAPB	Q9H115	298 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	PORCN	Q9H237	461 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	UBQLN3	Q9H347	655 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	RPRD1B	Q9NQG5	326 aa	Known RBP	4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	RAB20	Q9NX57	234 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	BAIAP2L1	Q9UHR4	511 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	DLGAP4	Q9Y2H0	992 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	NOSIP	Q9Y314	301 aa	Known RBP	4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	MFHAS1	Q9Y4C4	1052 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	MAB21L2	Q9Y586	359 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	N6AMT1	Q9Y5N5	214 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	CACNA1A	O00555	2505 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	REV3L	O60673	3130 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	XIRP2	A4UGR9	3374 aa		4.05	□□□□□ -1.76
PCM1-223	ENST00000524356	KIAA1217	Q5T5P2	1943 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	CHD9	Q3L8U1	2897 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	C15orf38-AP3S2	A0A0A6YYH1	394 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356		A0A0U1RQJ8	604 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	MACROD2	A1Z1Q3	448 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	TYW5	A2RUC4	315 aa	Known RBP	4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	TMEM221	A6NGB7	291 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	FAM47DP	A6NHR8	397 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356		H0Y8G0	127 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	MAGEB2	O15479	319 aa		4.04	□□□□□ -1.76
PCM1-223	ENST00000524356	CACNG3	O60359	315 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms