RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 SENP1Q9P0U3 644 aa11.88□□□□□ -0.51
VEGFA-225ENST00000523950 C3orf18Q9UK00 162 aa11.88□□□□□ -0.51
VEGFA-225ENST00000523950 PPT2Q9UMR5 302 aa11.88□□□□□ -0.51
VEGFA-225ENST00000523950 G3BP2Q9UN86 482 aaKnown RBP11.88□□□□□ -0.51
VEGFA-225ENST00000523950 PLAAQ9Y263 795 aa11.88□□□□□ -0.51
VEGFA-225ENST00000523950 DSPP15924 2871 aaKnown RBP11.88□□□□□ -0.51
VEGFA-225ENST00000523950 SCN3AQ9NY46 2000 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 LRRC14BA6NHZ5 514 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 ARGFXA6NJG6 315 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 IDSB3KWA1 339 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 MKRN2OSH3BPM6 223 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 OR7A17O14581 309 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 ERI3O43414 337 aaKnown RBP11.87□□□□□ -0.51
VEGFA-225ENST00000523950 DLX3O60479 287 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 OTCP00480 354 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 HEXBP07686 556 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 ATXN8OSP0DMR3 200 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 PCNAP12004 261 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 IMPDH1P20839 514 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 JAK1P23458 1154 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 TSFMP43897 325 aaKnown RBP11.87□□□□□ -0.51
VEGFA-225ENST00000523950 XCR1P46094 333 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 PRKAA2P54646 552 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 RAB8AP61006 207 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 MAT1AQ00266 395 aaKnown RBP11.87□□□□□ -0.51
VEGFA-225ENST00000523950 DMTNQ08495 405 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 ATP1A4Q13733 1029 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 COL9A2Q14055 689 aaPredicted RBP11.87□□□□□ -0.51
VEGFA-225ENST00000523950 SOWAHCQ53LP3 525 aaPredicted RBP11.87□□□□□ -0.51
VEGFA-225ENST00000523950 ZNF678Q5SXM1 525 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 FAM69BQ5VUD6 431 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 ZYG11AQ6WRX3 759 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 CHSY3Q70JA7 882 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 MYLK4Q86YV6 388 aaPredicted RBP11.87□□□□□ -0.51
VEGFA-225ENST00000523950 PPP4R1Q8TF05 950 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 L3HYPDHQ96EM0 354 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 CMTM7Q96FZ5 175 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 APOPT1Q96IL0 206 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 KCNC2Q96PR1 638 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 CENPKQ9BS16 269 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 IQCGQ9H095 443 aaKnown RBP11.87□□□□□ -0.51
VEGFA-225ENST00000523950 ING2Q9H160 280 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 KLHL31Q9H511 634 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 ZBTB26Q9HCK0 441 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 P4HTMQ9NXG6 502 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 HCN3Q9P1Z3 774 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 C19orf25Q9UFG5 118 aaPredicted RBP11.87□□□□□ -0.51
VEGFA-225ENST00000523950 EMCNQ9ULC0 261 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 PCDHGA9Q9Y5G4 932 aaKnown RBP11.87□□□□□ -0.51
VEGFA-225ENST00000523950 HS3ST3B1Q9Y662 390 aa11.87□□□□□ -0.51
VEGFA-225ENST00000523950 LOC102723996A0A087X1L8 192 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 SYNDIG1LA6NDD5 238 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 EIF4E1BA6NMX2 242 aaKnown RBP11.86□□□□□ -0.51
VEGFA-225ENST00000523950 H3BQF6 201 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 FOXE1O00358 373 aaPredicted RBP11.86□□□□□ -0.51
VEGFA-225ENST00000523950 SOCS6O14544 535 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 B3GALT2O43825 422 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 PLIN3O60664 434 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 CEACAM4O75871 244 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 SUPT7LO94864 414 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 MLYCDO95822 493 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 TBX6O95947 436 aaPredicted RBP11.86□□□□□ -0.51
VEGFA-225ENST00000523950 PROCP04070 461 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 FAM87AP0C7U9 286 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 MYL2P10916 166 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 RNH1P13489 461 aaKnown RBP11.86□□□□□ -0.51
VEGFA-225ENST00000523950 ACPPP15309 386 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 HNRNPH1P31943 449 aaKnown RBP11.86□□□□□ -0.51
VEGFA-225ENST00000523950 ARL1P40616 181 aaPredicted RBP11.86□□□□□ -0.51
VEGFA-225ENST00000523950 MTTPP55157 894 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 SOX8P57073 446 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 SNRPNP63162 240 aaKnown RBP11.86□□□□□ -0.51
VEGFA-225ENST00000523950 CLCQ05315 142 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 TRAF3Q13114 568 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 RCN2Q14257 317 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 SYT16Q17RD7 645 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 KRT71Q3SY84 523 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 TUBB8Q3ZCM7 444 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 DCAF10Q5QP82 559 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 ABHD17CQ6PCB6 329 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 TMEM205Q6UW68 189 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 SHISA6Q6ZSJ9 500 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 EXD3Q8N9H8 876 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 CLEC1AQ8NC01 280 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 OR52B6Q8NGF0 335 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 HUS1BQ8NHY5 278 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 C9orf43Q8TAL5 461 aaPredicted RBP11.86□□□□□ -0.51
VEGFA-225ENST00000523950 WDR20Q8TBZ3 569 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 METTL21AQ8WXB1 218 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 TBC1D20Q96BZ9 403 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 BBC3Q96PG8 261 aaPredicted RBP11.86□□□□□ -0.51
VEGFA-225ENST00000523950 TMEM237Q96Q45 408 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 SERINC2Q96SA4 455 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 TBCDQ9BTW9 1192 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 AICDAQ9GZX7 198 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 COPS7BQ9H9Q2 264 aaPredicted RBP11.86□□□□□ -0.51
VEGFA-225ENST00000523950 PRM3Q9NNZ6 103 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 SEMA4BQ9NPR2 832 aaPredicted RBP11.86□□□□□ -0.51
VEGFA-225ENST00000523950 DMRT3Q9NQL9 472 aa11.86□□□□□ -0.51
VEGFA-225ENST00000523950 TRPS1Q9UHF7 1281 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms