RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 SLC22A7Q9Y694 548 aa12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 RAI1Q7Z5J4 1906 aaPredicted RBP12.82□□□□□ -0.36
NKX3-1-202ENST00000523261 CR1P17927 2039 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 hCG_1818297A0A087WSY0 165 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 A0A087X1B8 175 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 E7ENX8 843 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 MYO1CO00159 1063 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 SIAH2O43255 324 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 KCNAB3O43448 404 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 TLX2O43763 284 aaPredicted RBP12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 PRKNO60260 465 aaPredicted RBP12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 OR2J2O76002 312 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 MATN4O95460 622 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 IL2RAP01589 272 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 DNASE1L1P49184 302 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 AGFG1P52594 562 aaKnown RBP12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 PNLIPRP1P54315 467 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 RPS15AP62244 130 aaKnown RBP12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 TAP2Q03519 686 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 HYAL2Q12891 473 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 SIX1Q15475 284 aaPredicted RBP12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 ZNF750Q32MQ0 723 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 ANKRD20A4Q4UJ75 823 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 ZNF534Q76KX8 674 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 ABHD13Q7L211 337 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 CAMKVQ8NCB2 501 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 PPFIBP2Q8ND30 876 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 ASB15Q8WXK1 588 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 PPP1R2P1Q96PQ5 205 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 SEMA4BQ9NPR2 832 aaPredicted RBP12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 TUBA8Q9NY65 449 aaPredicted RBP12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 TSR3Q9UJK0 312 aaKnown RBP12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 HYOU1Q9Y4L1 999 aa12.81□□□□□ -0.36
NKX3-1-202ENST00000523261 ROS1P08922 2347 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 NCKAP5O14513 1909 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 DEFB108AA8MXU0 73 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 AHRRA9YTQ3 701 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 SMAPO00193 183 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 PRMT5O14744 637 aaPredicted RBP12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 CASKO14936 926 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 CHST10O43529 356 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 FAM157CP0CG43 387 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 MAOAP21397 527 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 SOX3P41225 446 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 MEI1Q5TIA1 1274 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 AFTPHQ6ULP2 937 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 C20orf204Q6ZNR8 217 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 FAM47EQ6ZV65 393 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 OTOAQ7RTW8 1153 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 LDB1Q86U70 411 aaPredicted RBP12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 MEIOBQ8N635 442 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 ZNF480Q8WV37 535 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 IGFBPL1Q8WX77 278 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 LRRC45Q96CN5 670 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 THAP11Q96EK4 314 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 MRFAP1L1Q96HT8 127 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 PANX3Q96QZ0 392 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 PKP4Q99569 1192 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 LIN28AQ9H9Z2 209 aaKnown RBP12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 YAE1D1Q9NRH1 226 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 SLC2A6Q9UGQ3 507 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 PPIEQ9UNP9 301 aaKnown RBP12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 TGP01266 2768 aa12.8□□□□□ -0.36
NKX3-1-202ENST00000523261 DOCK7Q96N67 2140 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 RNF223E7ERA6 249 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 KPNA5O15131 536 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 CD5LO43866 347 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 MYO1DO94832 1006 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 SLC16A8O95907 504 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 TP53P04637 393 aaPredicted RBP12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 PAX1P15863 534 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 CTSSP25774 331 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 PPARGP37231 505 aaPredicted RBP12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 GPR143P51810 404 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 NR1H2P55055 460 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 OLR1P78380 273 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 PTRHD1Q6GMV3 140 aaKnown RBP12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 RTL4Q6ZR62 310 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 SLC26A11Q86WA9 606 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 AFAP1L2Q8N4X5 818 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 OR6P1Q8NGX9 317 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 OR4L1Q8NH43 312 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 SLC35G2Q8TBE7 412 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 HSPBAP1Q96EW2 488 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 VMP1Q96GC9 406 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 RASL10BQ96S79 203 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 RBM24Q9BX46 236 aaKnown RBP12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 SLC6A15Q9H2J7 730 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 NECTIN3Q9NQS3 549 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 ABCF3Q9NUQ8 709 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 SPTLC3Q9NUV7 552 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 TMEM184CQ9NVA4 438 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 GALNT8Q9NY28 637 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 C6orf203Q9P0P8 240 aaPredicted RBP12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 TESMINQ9Y4I5 508 aa12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.79□□□□□ -0.36
NKX3-1-202ENST00000523261 ZNF839A8K0R7 811 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 APOC4-APOC2K7ER74 178 aa12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 GALR3O60755 368 aaPredicted RBP12.78□□□□□ -0.36
NKX3-1-202ENST00000523261 ZFAND5O76080 213 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms