RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	CDKL4	Q5MAI5	379 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	ACER2	Q5QJU3	275 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	FCRLB	Q6BAA4	426 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	NIPAL1	Q6NVV3	410 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	PAPD4	Q6PIY7	484 aa	Known RBP	11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	FAM180A	Q6UWF9	173 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	TMIGD1	Q6UXZ0	262 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	CCDC25	Q86WR0	208 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	GPSM1	Q86YR5	675 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	11.63	□□□□□ -0.55	1e-6	■■■■■ 40.2
VEGFA-223	ENST00000523125	ESAM	Q96AP7	390 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	RAB17	Q9H0T7	212 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	CLK4	Q9HAZ1	481 aa	Known RBP	11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	MMP25	Q9NPA2	562 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	TXNDC16	Q9P2K2	825 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	PTBP2	Q9UKA9	531 aa	Known RBP	11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	SLC5A6	Q9Y289	635 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	TEX15	Q9BXT5	2789 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	MYO7B	Q6PIF6	2116 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	UNC79	Q9P2D8	2635 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	EML6	Q6ZMW3	1958 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	IGKV3D-11	A0A0A0MRZ8	115 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	LRIT2	A6NDA9	550 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	URAD	A6NGE7	173 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	MAN1A2	O60476	641 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	B4GALT2	O60909	372 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	H2AFY	O75367	372 aa	Known RBP	11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	SLC35E2B	P0CK96	405 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	EPOR	P19235	508 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	HNRNPH1	P31943	449 aa	Known RBP	11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	HSPA7	P48741	367 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	OR4D2	P58180	307 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	SLC26A5	P58743	744 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	ATP6V0D1	P61421	351 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	SLC7A5	Q01650	507 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	ACTN3	Q08043	901 aa	Predicted RBP	11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	DLG1	Q12959	904 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	ELOA	Q14241	798 aa	Known RBP	11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	SLBP	Q14493	270 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	EFTUD2	Q15029	972 aa	Known RBP eCLIP	11.62	□□□□□ -0.55	4e-10	■■■■■ 38.6
VEGFA-223	ENST00000523125	GRTP1	Q5TC63	336 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	ADNP2	Q6IQ32	1131 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	QSOX2	Q6ZRP7	698 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	VN1R5	Q7Z5H4	357 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	CRLF3	Q8IUI8	442 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	CTAGE3P	Q8IX95	158 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	BEST3	Q8N1M1	668 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	CA13	Q8N1Q1	262 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	TCAIM	Q8N3R3	496 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	PPM1N	Q8N819	430 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	BCORP1	Q8N888	145 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	PDPR	Q8NCN5	879 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	FBF1	Q8TES7	1133 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	KIAA1191	Q96A73	305 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	MS4A6E	Q96DS6	147 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	LPAR4	Q99677	370 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	11.62	□□□□□ -0.55	3e-8	■■□□□ 11.5
VEGFA-223	ENST00000523125	NT5DC2	Q9H857	520 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	KCNK13	Q9HB14	408 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	ZDHHC18	Q9NUE0	388 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	OLAH	Q9NV23	265 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	GPRC5B	Q9NZH0	403 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	TEKT2	Q9UIF3	430 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	ZNF490	Q9ULM2	529 aa	Predicted RBP	11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	ASB1	Q9Y576	335 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	ITPR2	Q14571	2701 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	GTF3C1	Q12789	2109 aa		11.62	□□□□□ -0.55
VEGFA-223	ENST00000523125	ESYT3	A0FGR9	886 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	PRMT3	O60678	531 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	PRAMEF2	O60811	474 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	CLDN1	O95832	211 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	UQCRH	P07919	91 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	RNH1	P13489	461 aa	Known RBP	11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	CD22	P20273	847 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	MAOA	P21397	527 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	JAK1	P23458	1154 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	SPR	P35270	261 aa	Predicted RBP	11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	ST13	P50502	369 aa	Known RBP	11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	SRSF11	Q05519	484 aa	Known RBP	11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	RUNX2	Q13950	521 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	DOC2A	Q14183	400 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	INA	Q16352	499 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	ADPRM	Q3LIE5	342 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	SULT1C3	Q6IMI6	304 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	CMC1	Q7Z7K0	106 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	ISCA2	Q86U28	154 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	KIF2B	Q8N4N8	673 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	MDS2	Q8NDY4	140 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	NFAM1	Q8NET5	270 aa	Predicted RBP	11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	ELP5	Q8TE02	316 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	NR4A3	Q92570	626 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	GAL3ST3	Q96A11	431 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	WDR34	Q96EX3	536 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	ZNF354B	Q96LW1	612 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	MAGEB10	Q96LZ2	347 aa	Predicted RBP	11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	PTCHD1	Q96NR3	888 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	QRFPR	Q96P65	431 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	SIGLEC12	Q96PQ1	595 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	LRRC1	Q9BTT6	524 aa		11.61	□□□□□ -0.55
VEGFA-223	ENST00000523125	CAPS2	Q9BXY5	557 aa		11.61	□□□□□ -0.55

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