RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 HFEQ30201 348 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 SLC36A3Q495N2 470 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 AASDHQ4L235 1098 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-216ENST00000523088 BCL7AQ4VC05 210 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 ATP13A5Q4VNC0 1218 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 PLA1AQ53H76 456 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 ACER2Q5QJU3 275 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 RABGAP1LQ5R372 815 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 FAXCQ5TGI0 409 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 LRRC38Q5VT99 294 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 UBE2UQ5VVX9 321 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 FAM46CQ5VWP2 391 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 EEF1DP3Q658K8 133 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 ASTLQ6HA08 431 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-216ENST00000523088 TMEM81Q6P7N7 255 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 KIAA1324Q6UXG2 1013 aaKnown RBP7.26□□□□□ -1.25
HDAC3-216ENST00000523088 WASH2PQ6VEQ5 465 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 TAS1R1Q7RTX1 841 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 PTRH1Q86Y79 214 aaKnown RBP7.26□□□□□ -1.25
HDAC3-216ENST00000523088 CPOQ8IVL8 374 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 STK40Q8N2I9 435 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 METTL4Q8N3J2 472 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 COMMD1Q8N668 190 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 OR1M1Q8NGA1 313 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 NDNFQ8TB73 568 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 GRHL3Q8TE85 626 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 CHTF18Q8WVB6 975 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 LARP4BQ92615 738 aaKnown RBP7.26□□□□□ -1.25
HDAC3-216ENST00000523088 ZNF707Q96C28 371 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-216ENST00000523088 RASD2Q96D21 266 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 CCDC120Q96HB5 630 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 SUSD3Q96L08 255 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 WFIKKN1Q96NZ8 548 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 ZNF347Q96SE7 839 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 PHOX2BQ99453 314 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 TEAD3Q99594 435 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 DOK1Q99704 481 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 PRRT1Q99946 306 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 SOX7Q9BT81 388 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 PDCD10Q9BUL8 212 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 GPR87Q9BY21 358 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 MFFQ9GZY8 342 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.26□□□□□ -1.25
HDAC3-216ENST00000523088 ST6GALNAC4Q9H4F1 302 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 SACM1LQ9NTJ5 587 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 POT1Q9NUX5 634 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 PARPBPQ9NWS1 579 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 TEX10Q9NXF1 929 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-216ENST00000523088 BABAM2Q9NXR7 383 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 BFARQ9NZS9 450 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 MARK1Q9P0L2 795 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 RAPGEFL1Q9UHV5 662 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 ZNF221Q9UK13 617 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 PPT2Q9UMR5 302 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 UBQLN1Q9UMX0 589 aaKnown RBP7.26□□□□□ -1.25
HDAC3-216ENST00000523088 STARD10Q9Y365 291 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 PSAT1Q9Y617 370 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 COPG1Q9Y678 874 aaKnown RBP7.26□□□□□ -1.25
HDAC3-216ENST00000523088 DOCK6Q96HP0 2047 aa7.26□□□□□ -1.25
HDAC3-216ENST00000523088 GABRR3A8MPY1 467 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 AGAP14A8MT82 685 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 A8MUI8 341 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 KDM4EB2RXH2 506 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-216ENST00000523088 KCNK1O00180 336 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 CTDSP2O14595 271 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 GALR2O43603 387 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-216ENST00000523088 SIGLEC6O43699 453 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 SNX3O60493 162 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 SNAP91O60641 907 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 RNASEH1O60930 286 aaKnown RBP7.25□□□□□ -1.25
HDAC3-216ENST00000523088 ECI2O75521 394 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 RFPL2O75678 378 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 GLCEO94923 617 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 AKR7A3O95154 331 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 NADKO95544 446 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-216ENST00000523088 GOT2P00505 430 aaKnown RBP7.25□□□□□ -1.25
HDAC3-216ENST00000523088 CLEC3BP05452 202 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 GPIP06744 558 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 STAG3L2P0CL84 134 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 SLC2A1P11166 492 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 PSKH1P11801 424 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 LAMP2P13473 410 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 LCP1P13796 627 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 SLC2A4P14672 509 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 JUPP14923 745 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 LBPP18428 481 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 HNRNPA2B1P22626 353 aaKnown RBP7.25□□□□□ -1.25
HDAC3-216ENST00000523088 PAX6P26367 422 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 IL1R2P27930 398 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 PIK3R1P27986 724 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 MARCKSP29966 332 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-216ENST00000523088 LCN1P31025 176 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 OR1D2P34982 312 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 CA5AP35218 305 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 RAP1GAPP47736 663 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 CAPZBP47756 277 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 HSPA7P48741 367 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 TGM4P49221 684 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 SMSP52788 366 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 SLC5A3P53794 718 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms