RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 IGHEP01854 428 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 EPB42P16452 691 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 CXCR2P25025 360 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 ITGA3P26006 1051 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 PIK3CGP48736 1102 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 PLA2G16P53816 162 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 BTN3A2P78410 334 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 RHAGQ02094 409 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 GTF2H2Q13888 395 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 RUNX2Q13950 521 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 MYBPC3Q14896 1274 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 TBCCQ15814 346 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 GTF2H2CQ6P1K8 395 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 TMEM205Q6UW68 189 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 ABHD13Q7L211 337 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 UBE3DQ7Z6J8 389 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 OR52B6Q8NGF0 335 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 GAL3ST3Q96A11 431 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 QRFPRQ96P65 431 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 CDK15Q96Q40 435 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 F2RL3Q96RI0 385 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 SMAD5Q99717 465 aaKnown RBP16.84■□□□□ 0.29
CLK4-211ENST00000522556 CAPS2Q9BXY5 557 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 MS4A8Q9BY19 250 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 MFRPQ9BY79 579 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 RHBGQ9H310 441 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 ZBTB26Q9HCK0 441 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 CSAG2Q9Y5P2 127 aa16.84■□□□□ 0.29
CLK4-211ENST00000522556 HEMK1Q9Y5R4 338 aaPredicted RBP16.84■□□□□ 0.29
CLK4-211ENST00000522556 LOC102723996A0A087X1L8 192 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 A0A1W2PQ72 361 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 ANKDD1BA6NHY2 528 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 A8MT66 165 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 RTCAO00442 366 aaKnown RBP16.83■□□□□ 0.28
CLK4-211ENST00000522556 OR7A17O14581 309 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 B4GALT2O60909 372 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 HPP00738 406 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 RBP1P09455 135 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 C8orf89P0DMQ9 161 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 PCNAP12004 261 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 COL6A2P12110 1019 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 TSPAN8P19075 237 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 CERS1P27544 350 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 HSD17B3P37058 310 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 CASP2P42575 452 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 BTG2P78543 158 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 AIMP2Q13155 320 aaKnown RBP16.83■□□□□ 0.28
CLK4-211ENST00000522556 TSNAXIP1Q2TAA8 658 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 ADPRMQ3LIE5 342 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 GRHL2Q6ISB3 625 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 ZNF793Q6ZN11 406 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 MYLK4Q86YV6 388 aaPredicted RBP16.83■□□□□ 0.28
CLK4-211ENST00000522556 LAS2Q8IYD9 372 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 CA13Q8N1Q1 262 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 RBMXL3Q8N7X1 1067 aaKnown RBP16.83■□□□□ 0.28
CLK4-211ENST00000522556 TMEM52Q8NDY8 209 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 OR7G3Q8NG95 312 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 ZNF473Q8WTR7 871 aaKnown RBP16.83■□□□□ 0.28
CLK4-211ENST00000522556 NACC2Q96BF6 587 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 SORBS1Q9BX66 1292 aaKnown RBP16.83■□□□□ 0.28
CLK4-211ENST00000522556 MRPL46Q9H2W6 279 aaKnown RBP16.83■□□□□ 0.28
CLK4-211ENST00000522556 ATP13A2Q9NQ11 1180 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 FETUBQ9UGM5 382 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 PCTPQ9UKL6 214 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 RNF11Q9Y3C5 154 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 ANGPTL3Q9Y5C1 460 aa16.83■□□□□ 0.28
CLK4-211ENST00000522556 FASNP49327 2511 aaKnown RBP16.83■□□□□ 0.28
CLK4-211ENST00000522556 CPAMD8Q8IZJ3 1885 aa16.82■□□□□ 0.28
CLK4-211ENST00000522556 CCDC189A1A4V9 331 aa16.82■□□□□ 0.28
CLK4-211ENST00000522556 SAP18O00422 153 aaKnown RBP16.82■□□□□ 0.28
CLK4-211ENST00000522556 PPP6CO00743 305 aa16.82■□□□□ 0.28
CLK4-211ENST00000522556 SEC24DO94855 1032 aaPredicted RBP16.82■□□□□ 0.28
CLK4-211ENST00000522556 FHP07954 510 aa16.82■□□□□ 0.28
CLK4-211ENST00000522556 PYGBP11216 843 aa16.82■□□□□ 0.28
CLK4-211ENST00000522556 HNRNPFP52597 415 aaKnown RBP16.82■□□□□ 0.28
CLK4-211ENST00000522556 PCDH1Q08174 1060 aa16.82■□□□□ 0.28
CLK4-211ENST00000522556 DDX39BQ13838 428 aaKnown RBP16.82■□□□□ 0.28
CLK4-211ENST00000522556 ERCC6LQ2NKX8 1250 aa16.82■□□□□ 0.28
CLK4-211ENST00000522556 VWA5B1Q5TIE3 1220 aa16.82■□□□□ 0.28
CLK4-211ENST00000522556 MED27Q6P2C8 311 aa16.82■□□□□ 0.28
CLK4-211ENST00000522556 ANKRD37Q7Z713 158 aa16.82■□□□□ 0.28
CLK4-211ENST00000522556 TTLQ8NG68 377 aa16.82■□□□□ 0.28
CLK4-211ENST00000522556 OR2L5Q8NG80 312 aa16.82■□□□□ 0.28
CLK4-211ENST00000522556 AENQ8WTP8 325 aaKnown RBP16.82■□□□□ 0.28
CLK4-211ENST00000522556 TBC1D20Q96BZ9 403 aa16.82■□□□□ 0.28
CLK4-211ENST00000522556 MTBPQ96DY7 904 aa16.82■□□□□ 0.28
CLK4-211ENST00000522556 THOC3Q96J01 351 aaKnown RBP16.82■□□□□ 0.28
CLK4-211ENST00000522556 CSF3RQ99062 836 aa16.82■□□□□ 0.28
CLK4-211ENST00000522556 WDR77Q9BQA1 342 aaPredicted RBP16.82■□□□□ 0.28
CLK4-211ENST00000522556 MRPL57Q9BQC6 102 aaKnown RBP16.82■□□□□ 0.28
CLK4-211ENST00000522556 REXO4Q9GZR2 422 aaKnown RBP16.82■□□□□ 0.28
CLK4-211ENST00000522556 C12orf65Q9H3J6 166 aaKnown RBP16.82■□□□□ 0.28
CLK4-211ENST00000522556 IPPKQ9H8X2 491 aa16.82■□□□□ 0.28
CLK4-211ENST00000522556 EMCNQ9ULC0 261 aa16.82■□□□□ 0.28
CLK4-211ENST00000522556 NSG1A0A0A6YYJ2 146 aa16.81■□□□□ 0.28
CLK4-211ENST00000522556 IQANK1A0A1B0GTG1 560 aa16.81■□□□□ 0.28
CLK4-211ENST00000522556 TGFBR3LH3BV60 316 aa16.81■□□□□ 0.28
CLK4-211ENST00000522556 TGFB1P01137 390 aa16.81■□□□□ 0.28
CLK4-211ENST00000522556 RPS17P08708 135 aaKnown RBP16.81■□□□□ 0.28
CLK4-211ENST00000522556 MAOAP21397 527 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms