RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 AP2B1P63010 937 aa20.26■□□□□ 0.83
HOXA3-204ENST00000521401 BTBD16Q32M84 506 aa20.26■□□□□ 0.83
HOXA3-204ENST00000521401 SFT2D3Q587I9 215 aa20.26■□□□□ 0.83
HOXA3-204ENST00000521401 ADNP2Q6IQ32 1131 aa20.26■□□□□ 0.83
HOXA3-204ENST00000521401 H3F3CQ6NXT2 135 aa20.26■□□□□ 0.83
HOXA3-204ENST00000521401 RPUSD3Q6P087 351 aaKnown RBP20.26■□□□□ 0.83
HOXA3-204ENST00000521401 PAPD4Q6PIY7 484 aaKnown RBP20.26■□□□□ 0.83
HOXA3-204ENST00000521401 CENPLQ8N0S6 344 aaPredicted RBP20.26■□□□□ 0.83
HOXA3-204ENST00000521401 CA13Q8N1Q1 262 aa20.26■□□□□ 0.83
HOXA3-204ENST00000521401 TTLQ8NG68 377 aa20.26■□□□□ 0.83
HOXA3-204ENST00000521401 GRHL3Q8TE85 626 aa20.26■□□□□ 0.83
HOXA3-204ENST00000521401 NXNL1Q96CM4 212 aa20.26■□□□□ 0.83
HOXA3-204ENST00000521401 MS4A6EQ96DS6 147 aa20.26■□□□□ 0.83
HOXA3-204ENST00000521401 PSMG3-AS1Q96PY0 264 aa20.26■□□□□ 0.83
HOXA3-204ENST00000521401 PITHD1Q9GZP4 211 aaPredicted RBP20.26■□□□□ 0.83
HOXA3-204ENST00000521401 RNF32Q9H0A6 362 aa20.26■□□□□ 0.83
HOXA3-204ENST00000521401 NMRAL1Q9HBL8 299 aa20.26■□□□□ 0.83
HOXA3-204ENST00000521401 SETXQ7Z333 2677 aaKnown RBP20.26■□□□□ 0.83
HOXA3-204ENST00000521401 FLNCQ14315 2725 aa20.26■□□□□ 0.83
HOXA3-204ENST00000521401 DYTNA2CJ06 578 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 LRIT2A6NDA9 550 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 FAM227AF5H4B4 570 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 E2F3O00716 465 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 B4GALT2O60909 372 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 KERAO60938 352 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 F10P00742 488 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 LTA4HP09960 611 aaKnown RBP20.25■□□□□ 0.83
HOXA3-204ENST00000521401 MTHFD2P13995 350 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 GSTM2P28161 218 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 ECHS1P30084 290 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 STXBP1P61764 594 aaKnown RBP20.25■□□□□ 0.83
HOXA3-204ENST00000521401 BTG2P78543 158 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 BMPR2Q13873 1038 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 DOC2AQ14183 400 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 E2F2Q14209 437 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 PDK4Q16654 411 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 ADPRMQ3LIE5 342 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 MROH9Q5TGP6 573 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 QSOX2Q6ZRP7 698 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 TBC1D1Q86TI0 1168 aaPredicted RBP20.25■□□□□ 0.83
HOXA3-204ENST00000521401 KRT78Q8N1N4 520 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 SNX31Q8N9S9 440 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 OR1N1Q8NGS0 311 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 M1APQ8TC57 530 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 EXT2Q93063 718 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 GAL3ST3Q96A11 431 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 MRRFQ96E11 262 aaKnown RBP20.25■□□□□ 0.83
HOXA3-204ENST00000521401 SEC16BQ96JE7 1060 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 FUT8Q9BYC5 575 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 CD244Q9BZW8 370 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 MMP25Q9NPA2 562 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 NUDT4Q9NZJ9 180 aa20.25■□□□□ 0.83
HOXA3-204ENST00000521401 UBXN8O00124 270 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 CLGNO14967 610 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 CLEC3AO75596 197 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 C2P06681 752 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 RNF224P0DH78 156 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 JAK1P23458 1154 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 OR4D2P58180 307 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 BTN3A2P78410 334 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 IRF9Q00978 393 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 RUNX2Q13950 521 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 EXT1Q16394 746 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 XKR6Q5GH73 641 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 LRRC70Q7Z2Q7 622 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 KCTD4Q8WVF5 259 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 PTCD3Q96EY7 689 aaKnown RBP20.24■□□□□ 0.83
HOXA3-204ENST00000521401 QRFPRQ96P65 431 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 LPAR4Q99677 370 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 NPAS2Q99743 824 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 RHBGQ9H310 441 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 ACSS3Q9H6R3 686 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 SNX15Q9NRS6 342 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 AGPAT4Q9NRZ5 378 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 STMN3Q9NZ72 180 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 ACOT9Q9Y305 439 aa20.24■□□□□ 0.83
HOXA3-204ENST00000521401 IGKV3D-11A0A0A0MRZ8 115 aa20.23■□□□□ 0.83
HOXA3-204ENST00000521401 TRAV17A0A0B4J275 112 aa20.23■□□□□ 0.83
HOXA3-204ENST00000521401 A0A0G2JN53 185 aa20.23■□□□□ 0.83
HOXA3-204ENST00000521401 BLACEA4D250 179 aa20.23■□□□□ 0.83
HOXA3-204ENST00000521401 ANKUB1A6NFN9 424 aa20.23■□□□□ 0.83
HOXA3-204ENST00000521401 A8MUI8 341 aa20.23■□□□□ 0.83
HOXA3-204ENST00000521401 CCNT2O60583 730 aaKnown RBP20.23■□□□□ 0.83
HOXA3-204ENST00000521401 AGFG2O95081 481 aa20.23■□□□□ 0.83
HOXA3-204ENST00000521401 RNH1P13489 461 aaKnown RBP20.23■□□□□ 0.83
HOXA3-204ENST00000521401 SLC26A5P58743 744 aa20.23■□□□□ 0.83
HOXA3-204ENST00000521401 ACTN3Q08043 901 aaPredicted RBP20.23■□□□□ 0.83
HOXA3-204ENST00000521401 TBCCQ15814 346 aa20.23■□□□□ 0.83
HOXA3-204ENST00000521401 ABHD17BQ5VST6 288 aa20.23■□□□□ 0.83
HOXA3-204ENST00000521401 FCRLBQ6BAA4 426 aa20.23■□□□□ 0.83
HOXA3-204ENST00000521401 PRR7Q8TB68 274 aa20.23■□□□□ 0.83
HOXA3-204ENST00000521401 UBTD2Q8WUN7 234 aa20.23■□□□□ 0.83
HOXA3-204ENST00000521401 FAR1Q8WVX9 515 aa20.23■□□□□ 0.83
HOXA3-204ENST00000521401 PTCHD1Q96NR3 888 aa20.23■□□□□ 0.83
HOXA3-204ENST00000521401 CDC42EP4Q9H3Q1 356 aaKnown RBP20.23■□□□□ 0.83
HOXA3-204ENST00000521401 NECTIN3Q9NQS3 549 aa20.23■□□□□ 0.83
HOXA3-204ENST00000521401 MTRF1LQ9UGC7 380 aaKnown RBP20.23■□□□□ 0.83
HOXA3-204ENST00000521401 HECTD1Q9ULT8 2610 aa20.23■□□□□ 0.83
HOXA3-204ENST00000521401 DOPEY2Q9Y3R5 2298 aa20.22■□□□□ 0.83
HOXA3-204ENST00000521401 A0A087X1B8 175 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms