RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 SIX1Q15475 284 aaPredicted RBP3.82□□□□□ -1.8
CLK4-207ENST00000520909 DPYSL2Q16555 572 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 TAZQ16635 292 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 ANKRD20A8PQ5CZ79 823 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 BRMS1LQ5PSV4 323 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 HECTD3Q5T447 861 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 SYCP2LQ5T4T6 812 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 C8orf74Q6P047 294 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 C1orf228Q6PIY5 440 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 BNIPLQ7Z465 357 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 MAATS1Q7Z4T9 603 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 TADA2BQ86TJ2 420 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 TBC1D26Q86UD7 250 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 PSTKQ8IV42 348 aaKnown RBP3.82□□□□□ -1.8
CLK4-207ENST00000520909 RNF113BQ8IZP6 322 aaKnown RBP3.82□□□□□ -1.8
CLK4-207ENST00000520909 CCDC26Q8TAB7 109 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 CSGALNACT1Q8TDX6 532 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 PSMG2Q969U7 264 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 NTAN1Q96AB6 310 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 HAUS1Q96CS2 278 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 PGAP3Q96FM1 320 aaPredicted RBP3.82□□□□□ -1.8
CLK4-207ENST00000520909 ZC3HAV1LQ96H79 300 aaKnown RBP3.82□□□□□ -1.8
CLK4-207ENST00000520909 SERPINB11Q96P15 392 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 CSPG4P5Q96PW8 444 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 RNF157Q96PX1 679 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 GCNAQ96QF7 691 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 EGFL8Q99944 293 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 CRB3Q9BUF7 120 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 DDX47Q9H0S4 455 aaKnown RBP3.82□□□□□ -1.8
CLK4-207ENST00000520909 PLEKHA4Q9H4M7 779 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 TLE6Q9H808 572 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 SLC28A3Q9HAS3 691 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 TRPC7Q9HCX4 862 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 SLC7A10Q9NS82 523 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 HOMER3Q9NSC5 361 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 HCFC1R1Q9NWW0 138 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 MTMR10Q9NXD2 777 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 CWC15Q9P013 229 aaKnown RBP3.82□□□□□ -1.8
CLK4-207ENST00000520909 UXTQ9UBK9 157 aaPredicted RBP3.82□□□□□ -1.8
CLK4-207ENST00000520909 SLC12A6Q9UHW9 1150 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 RNF215Q9Y6U7 377 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 TSC2P49815 1807 aa3.82□□□□□ -1.8
CLK4-207ENST00000520909 NOTCH2Q04721 2471 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 PTPRSQ13332 1948 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 ARHGAP10A1A4S6 786 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 EPOPA6NHQ4 379 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 ZNF487B1APH4 448 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 H7C0C1 242 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 MCF2LO15068 1137 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 TTI1O43156 1089 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 RAD51CO43502 376 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 CHRM4P08173 479 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 HNRNPA1P09651 372 aaKnown RBP eCLIP3.81□□□□□ -1.8
CLK4-207ENST00000520909 IRF1P10914 325 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 MBL2P11226 248 aaPredicted RBP3.81□□□□□ -1.8
CLK4-207ENST00000520909 GOT1P17174 413 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 ITGA2P17301 1181 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 PTPN2P17706 415 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 IL4RP24394 825 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 GABRR2P28476 465 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 CDC25CP30307 473 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 CHRNB4P30926 498 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 CHRNA3P32297 505 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 ATP5OP48047 213 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 NRIP1P48552 1158 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 FNTAP49354 379 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 AIF1P55008 147 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 VCPP55072 806 aaKnown RBP3.81□□□□□ -1.8
CLK4-207ENST00000520909 TPI1P60174 286 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 EIF3EP60228 445 aaKnown RBP3.81□□□□□ -1.8
CLK4-207ENST00000520909 COG7P83436 770 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 DR1Q01658 176 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 OTUD4Q01804 1114 aaKnown RBP3.81□□□□□ -1.8
CLK4-207ENST00000520909 GUCY2DQ02846 1103 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 FOXO1Q12778 655 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 PPP1R7Q15435 360 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 CCNG2Q16589 344 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 KCTD19Q17RG1 926 aaPredicted RBP3.81□□□□□ -1.8
CLK4-207ENST00000520909 LCE3AQ5TA76 89 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 SNX30Q5VWJ9 437 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 TXNDC8Q6A555 127 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 RWDD4Q6NW29 188 aaKnown RBP3.81□□□□□ -1.8
CLK4-207ENST00000520909 TTC27Q6P3X3 843 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 CCDC137Q6PK04 289 aaKnown RBP3.81□□□□□ -1.8
CLK4-207ENST00000520909 LRRC31Q6UY01 552 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 BBS12Q6ZW61 710 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 GSTA5Q7RTV2 222 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 ADGRD2Q7Z7M1 963 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 UNC45BQ8IWX7 931 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 CHERPQ8IWX8 916 aaKnown RBP3.81□□□□□ -1.8
CLK4-207ENST00000520909 TDHQ8IZJ6 230 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 CACNA2D3Q8IZS8 1091 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 PQLC3Q8N755 202 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 PLD5Q8N7P1 536 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 ATP6V0D2Q8N8Y2 350 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 ACTL9Q8TC94 416 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 GRK7Q8WTQ7 553 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 PPM1EQ8WY54 764 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 IFT81Q8WYA0 676 aa3.81□□□□□ -1.8
CLK4-207ENST00000520909 MRPS31Q92665 395 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms