RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 MMP28Q9H239 520 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 MEAF6Q9HAF1 191 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 SEBOXQ9HB31 216 aaPredicted RBP8.32□□□□□ -1.08
SHPRH-208ENST00000520752 NMRAL1Q9HBL8 299 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 EML4Q9HC35 981 aaKnown RBP8.32□□□□□ -1.08
SHPRH-208ENST00000520752 VAT1LQ9HCJ6 419 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 MRPS30Q9NP92 439 aaKnown RBP8.32□□□□□ -1.08
SHPRH-208ENST00000520752 PLCXD1Q9NUJ7 323 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 RBAKQ9NYW8 714 aaPredicted RBP8.32□□□□□ -1.08
SHPRH-208ENST00000520752 TREM2Q9NZC2 230 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 MED11Q9P086 117 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 SH3BP4Q9P0V3 963 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 PPP4R1LQ9P1A2 415 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 TRPS1Q9UHF7 1281 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 ACSL6Q9UKU0 697 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 MGAT4AQ9UM21 535 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 AGTPBP1Q9UPW5 1226 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 CRYL1Q9Y2S2 319 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 SLC6A5Q9Y345 797 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 PCDHB7Q9Y5E2 793 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 PCDHGA2Q9Y5H1 932 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 TNRC6CQ9HCJ0 1690 aaKnown RBP8.32□□□□□ -1.08
SHPRH-208ENST00000520752 PAPPAQ13219 1627 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 FRMPD2Q68DX3 1309 aaPredicted RBP8.31□□□□□ -1.08
SHPRH-208ENST00000520752 MEGF6O75095 1541 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 A0A0B4J293 547 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 BLACEA4D250 179 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 RRN3P2A6NIE6 340 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 RHPN2P1A8MT19 583 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 TPST1O60507 370 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 MATN4O95460 622 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 PTBP3O95758 552 aaKnown RBP8.31□□□□□ -1.08
SHPRH-208ENST00000520752 GLUD1P00367 558 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 POMCP01189 267 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 FCER2P06734 321 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 ACAA1P09110 424 aaPredicted RBP8.31□□□□□ -1.08
SHPRH-208ENST00000520752 IL1RNP18510 177 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 KIR2DL3P43628 341 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 PCP4P48539 62 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 KPNA2P52292 529 aaKnown RBP8.31□□□□□ -1.08
SHPRH-208ENST00000520752 CDH4P55283 916 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 ARPP19P56211 112 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 KCNJ10P78508 379 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 SP2Q02086 613 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 SMTNL2Q2TAL5 461 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 HFEQ30201 348 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 ZNF528Q3MIS6 628 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 HSDL1Q3SXM5 330 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 GLYR1Q49A26 553 aaPredicted RBP8.31□□□□□ -1.08
SHPRH-208ENST00000520752 ARL13AQ5H913 290 aaPredicted RBP8.31□□□□□ -1.08
SHPRH-208ENST00000520752 NHLRC3Q5JS37 347 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 CD276Q5ZPR3 534 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 B3GNTL1Q67FW5 361 aaPredicted RBP8.31□□□□□ -1.08
SHPRH-208ENST00000520752 TBPL2Q6SJ96 375 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 TMEM107Q6UX40 140 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 FAM92BQ6ZTR7 304 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 ZNF720Q7Z2F6 126 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 PIWIL4Q7Z3Z4 852 aaKnown RBP8.31□□□□□ -1.08
SHPRH-208ENST00000520752 ZER1Q7Z7L7 766 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 ADGRD2Q7Z7M1 963 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 COMTD1Q86VU5 262 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 TRIM69Q86WT6 500 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 DENND6AQ8IWF6 608 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 ADHFE1Q8IWW8 467 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 TRIM48Q8IWZ4 208 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 C11orf65Q8NCR3 313 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 RCBTB1Q8NDN9 531 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 OR6C4Q8NGE1 309 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 OR52K1Q8NGK4 314 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 ZNF461Q8TAF7 563 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 HEXDCQ8WVB3 486 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 SLC25A36Q96CQ1 311 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 ELP4Q96EB1 424 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 RNF31Q96EP0 1072 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 LURAP1Q96LR2 239 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 Q96MT0 163 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 RBP7Q96R05 134 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 MCCC1Q96RQ3 725 aaPredicted RBP8.31□□□□□ -1.08
SHPRH-208ENST00000520752 AMBRA1Q9C0C7 1298 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 GABARAPL1Q9H0R8 117 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 C11orf54Q9H0W9 315 aaPredicted RBP8.31□□□□□ -1.08
SHPRH-208ENST00000520752 MIXL1Q9H2W2 232 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 ANKRD19PQ9H560 264 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 UNKLQ9H9P5 680 aaKnown RBP8.31□□□□□ -1.08
SHPRH-208ENST00000520752 SLC52A2Q9HAB3 445 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 PLAC1Q9HBJ0 212 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 ZBTB20Q9HC78 741 aaPredicted RBP8.31□□□□□ -1.08
SHPRH-208ENST00000520752 C19orf12Q9NSK7 152 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 C14orf119Q9NWQ9 140 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 SEC14L4Q9UDX3 406 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 AFF4Q9UHB7 1163 aaKnown RBP8.31□□□□□ -1.08
SHPRH-208ENST00000520752 PNMA8BQ9ULN7 279 aaPredicted RBP8.31□□□□□ -1.08
SHPRH-208ENST00000520752 PCDHA9Q9Y5H5 950 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 PIAS3Q9Y6X2 628 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 V9GYH0 126 aa8.31□□□□□ -1.08
SHPRH-208ENST00000520752 UBR2Q8IWV8 1755 aa8.3□□□□□ -1.08
SHPRH-208ENST00000520752 TNS3Q68CZ2 1445 aa8.3□□□□□ -1.08
SHPRH-208ENST00000520752 C3orf70A6NLC5 250 aaPredicted RBP8.3□□□□□ -1.08
SHPRH-208ENST00000520752 FABP7O15540 132 aa8.3□□□□□ -1.08
SHPRH-208ENST00000520752 PSPNO60542 156 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms