RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 MOSPD3O75425 235 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 JRKO75564 520 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 PRKD3O94806 890 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 ATE1O95260 518 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 CLIC3O95833 236 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 CST1P01037 141 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 FTH1P02794 183 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 SRPRAP08240 638 aaKnown RBP4.86□□□□□ -1.63
SDC2-204ENST00000519914 HTR1AP08908 422 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 HIST1H2AGP0C0S8 130 aaPredicted RBP4.86□□□□□ -1.63
SDC2-204ENST00000519914 MED14OSP0DP75 135 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 PABPC1P11940 636 aaKnown RBP4.86□□□□□ -1.63
SDC2-204ENST00000519914 ZNF12P17014 697 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 ITGB6P18564 788 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 NELFEP18615 380 aaKnown RBP4.86□□□□□ -1.63
SDC2-204ENST00000519914 HIST1H2ADP20671 130 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 FPR1P21462 350 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 PPIBP23284 216 aaKnown RBP4.86□□□□□ -1.63
SDC2-204ENST00000519914 DNAJA1P31689 397 aaKnown RBP4.86□□□□□ -1.63
SDC2-204ENST00000519914 GKP32189 559 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 POLR2IP36954 125 aaKnown RBP4.86□□□□□ -1.63
SDC2-204ENST00000519914 GDF5P43026 501 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 ASMTP46597 345 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 RXRGP48443 463 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 PRLHRP49683 370 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 TMED10P49755 219 aaKnown RBP4.86□□□□□ -1.63
SDC2-204ENST00000519914 GALK1P51570 392 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 RAD23AP54725 363 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 ITGA1P56199 1179 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 CYP4F8P98187 520 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 CD47Q08722 323 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 NFATC3Q12968 1075 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 KCNAB2Q13303 367 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 MOGQ16653 247 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 UGT8Q16880 541 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 VMACQ2NL98 169 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 HKDC1Q2TB90 917 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 DEFB115Q30KQ5 88 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 PTCHD3Q3KNS1 767 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 ZNF829Q3KNS6 432 aaPredicted RBP4.86□□□□□ -1.63
SDC2-204ENST00000519914 GTDC1Q4AE62 458 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 BCL7AQ4VC05 210 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 LDLRAP1Q5SW96 308 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 DEPDC1Q5TB30 811 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 MLIPQ5VWP3 458 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 NOXRED1Q6NXP6 359 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 TMEM53Q6P2H8 277 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 FAHD1Q6P587 224 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 ISLR2Q6UXK2 745 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 GDPD4Q6W3E5 623 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 MBOAT1Q6ZNC8 495 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 DPY19L3Q6ZPD9 716 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 DPPA4Q7L190 304 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 EIF3MQ7L2H7 374 aaKnown RBP4.86□□□□□ -1.63
SDC2-204ENST00000519914 ZNF551Q7Z340 670 aaPredicted RBP4.86□□□□□ -1.63
SDC2-204ENST00000519914 TECPR1Q7Z6L1 1165 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 TMEM179BQ7Z7N9 219 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 STK32CQ86UX6 486 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 ADIPOR2Q86V24 386 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 PTOV1Q86YD1 416 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 DCP2Q8IU60 420 aaKnown RBP4.86□□□□□ -1.63
SDC2-204ENST00000519914 MRPL41Q8IXM3 137 aaKnown RBP4.86□□□□□ -1.63
SDC2-204ENST00000519914 ZZZ3Q8IYH5 903 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 NRSN1Q8IZ57 195 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 OFCC1Q8IZS5 231 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 SPARTQ8N0X7 666 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 CLEC4FQ8N1N0 589 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 C10orf111Q8N326 155 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 SYNPOQ8N3V7 929 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 FAM86B1Q8N7N1 296 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 ARL10Q8N8L6 244 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 SETD9Q8NE22 299 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 PIK3C3Q8NEB9 887 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 ZNF555Q8NEP9 628 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 VPS37AQ8NEZ2 397 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 OR6K2Q8NGY2 324 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 OR56A3Q8NH54 315 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 MCOLN3Q8TDD5 553 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 FRS2Q8WU20 508 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 SNX19Q92543 992 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 TANKQ92844 425 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 BORCS5Q969J3 196 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 FAM162AQ96A26 154 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 COQ8BQ96D53 544 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 FAM120BQ96EK7 910 aaKnown RBP4.86□□□□□ -1.63
SDC2-204ENST00000519914 APIPQ96GX9 242 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 HIST1H2AHQ96KK5 128 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 RPL10LQ96L21 214 aaKnown RBP4.86□□□□□ -1.63
SDC2-204ENST00000519914 LINC00615Q96LM1 132 aaPredicted RBP4.86□□□□□ -1.63
SDC2-204ENST00000519914 CCDC138Q96M89 665 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 HIST1H2AJQ99878 128 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 PSD2Q9BQI7 771 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 H2AFJQ9BTM1 129 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 ZSCAN5AQ9BUG6 496 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 THUMPD3Q9BV44 507 aaKnown RBP4.86□□□□□ -1.63
SDC2-204ENST00000519914 APOL5Q9BWW9 433 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 SLC46A2Q9BY10 475 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 ASPSCR1Q9BZE9 553 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 MIR1-1HGQ9H1L0 117 aa4.86□□□□□ -1.63
SDC2-204ENST00000519914 EHD1Q9H4M9 534 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms