RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 KRTAP19-1Q8IUB9 90 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 FAM71AQ8IYT1 594 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 GCNT2Q8N0V5 402 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 OR9A4Q8NGU2 314 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 NEIL3Q8TAT5 605 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 C10orf105Q8TEF2 133 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 SREK1Q8WXA9 508 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 MAML1Q92585 1016 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 SCYL1Q96KG9 808 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 TRAF4Q9BUZ4 470 aaPredicted RBP6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 SNRNP25Q9BV90 132 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 C1QTNF5Q9BXJ0 243 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 TMPRSS13Q9BYE2 586 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 GPR63Q9BZJ6 419 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 PRDM14Q9GZV8 571 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 EXO5Q9H790 373 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 UNKLQ9H9P5 680 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 LANCL2Q9NS86 450 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 RAD18Q9NS91 495 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 C19orf25Q9UFG5 118 aaPredicted RBP6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 B3GALT5Q9Y2C3 310 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 TDRKHQ9Y2W6 561 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 EML6Q6ZMW3 1958 aa6.16□□□□□ -1.42
CTNNA1-216ENST00000519489 FRAS1Q86XX4 4008 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 IGHV4-61A0A0C4DH41 118 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 KRT87PA6NCN2 255 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 VWC2LB2RUY7 222 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 EREGO14944 169 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 DAPK3O43293 454 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 EIF4EBP3O60516 100 aaPredicted RBP6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 CCL3P10147 92 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 SLC25A16P16260 332 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 CHRNB2P17787 502 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 CNR1P21554 472 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 CD79BP40259 229 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 XCR1P46094 333 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 PRLHRP49683 370 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 CDH6P55285 790 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 ACTN3Q08043 901 aaPredicted RBP6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 ABRAXAS2Q15018 415 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 PDK1Q15118 436 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 BEAN1Q3B7T3 259 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 RNF187Q5TA31 235 aaPredicted RBP6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 MFSD4BQ5TF39 518 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 IL20RBQ6UXL0 311 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 DEF8Q6ZN54 512 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 KRBA2Q6ZNG9 492 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 CENPQQ7L2Z9 268 aaPredicted RBP6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 ENOSF1Q7L5Y1 443 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 ATG4DQ86TL0 474 aaPredicted RBP6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 TRIM59Q8IWR1 403 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 CEP57L1Q8IYX8 460 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 ATPAF2Q8N5M1 289 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 CNTD1Q8N815 330 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 ZDHHC22Q8N966 263 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 SNX31Q8N9S9 440 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 APCDD1LQ8NCL9 501 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 SMAP2Q8WU79 429 aaPredicted RBP6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 INTS12Q96CB8 462 aaKnown RBP6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 HSPBAP1Q96EW2 488 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 MVB12AQ96EY5 273 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 PLPPR2Q96GM1 343 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 WDYHV1Q96HA8 205 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 HS6ST2Q96MM7 605 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 LPAR4Q99677 370 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 FAM173AQ9BQD7 235 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 RBM4Q9BWF3 364 aaKnown RBP6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 RBCK1Q9BYM8 510 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 VPS16Q9H269 839 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 KCNF1Q9H3M0 494 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 METTL17Q9H7H0 456 aaPredicted RBP6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 ZNF703Q9H7S9 590 aaPredicted RBP6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 RBM22Q9NW64 420 aaKnown RBP eCLIP6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 SYBUQ9NX95 663 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 HCN3Q9P1Z3 774 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 CDC14AQ9UNH5 594 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 TTLL3Q9Y4R7 772 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 KLK4Q9Y5K2 254 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 PTGDR2Q9Y5Y4 395 aa6.15□□□□□ -1.42
CTNNA1-216ENST00000519489 FREM3P0C091 2139 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 IFRD1O00458 451 aaPredicted RBP6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 CDC123O75794 336 aaPredicted RBP6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 LY6HO94772 140 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 HKR1P10072 659 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 KRT3P12035 628 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 MSH3P20585 1137 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 AKT1P31749 480 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 PIGAP37287 484 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 SOX3P41225 446 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 AGTR2P50052 363 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 ZNF143P52747 638 aaPredicted RBP6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 OR4D2P58180 307 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 KRT85P78386 507 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 DUSP8Q13202 625 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 NSDHLQ15738 373 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 PPP2R5EQ16537 467 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 CPSF6Q16630 551 aaKnown RBP eCLIP6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 BEX5Q5H9J7 111 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 PPP6R3Q5H9R7 873 aaPredicted RBP6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 ADAM5Q6NVV9 412 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms