RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 C1orf189Q5VU69 101 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 GARNL3Q5VVW2 1013 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 FAM47EQ6ZV65 393 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 TTLL10Q6ZVT0 673 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 ZFAND4Q86XD8 727 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 DTX1Q86Y01 620 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 TMEM126BQ8IUX1 230 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 WDR75Q8IWA0 830 aaKnown RBP9.38□□□□□ -0.91
CLN8-202ENST00000517514 DSELQ8IZU8 1212 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 TBC1D19Q8N5T2 526 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 METTL27Q8N6F8 245 aaPredicted RBP9.38□□□□□ -0.91
CLN8-202ENST00000517514 OR2L5Q8NG80 312 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 OR9A4Q8NGU2 314 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 CHTF18Q8WVB6 975 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 CCT6BQ92526 530 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 GATA6Q92908 595 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 GAL3ST3Q96A11 431 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 REPS1Q96D71 796 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 APIPQ96GX9 242 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 MRPL1Q9BYD6 325 aaKnown RBP9.38□□□□□ -0.91
CLN8-202ENST00000517514 REXO4Q9GZR2 422 aaKnown RBP9.38□□□□□ -0.91
CLN8-202ENST00000517514 ACTR5Q9H9F9 607 aaPredicted RBP9.38□□□□□ -0.91
CLN8-202ENST00000517514 BRF2Q9HAW0 419 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 FANCEQ9HB96 536 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 MARCOQ9UEW3 520 aaPredicted RBP9.38□□□□□ -0.91
CLN8-202ENST00000517514 PCDHGA7Q9Y5G6 932 aa9.38□□□□□ -0.91
CLN8-202ENST00000517514 ZNF860A6NHJ4 632 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 SGK494L7N484 410 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 TXNDC9O14530 226 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 TERTO14746 1132 aaKnown RBP9.37□□□□□ -0.91
CLN8-202ENST00000517514 ERI3O43414 337 aaKnown RBP9.37□□□□□ -0.91
CLN8-202ENST00000517514 TLX3O43711 291 aaPredicted RBP9.37□□□□□ -0.91
CLN8-202ENST00000517514 GALR3O60755 368 aaPredicted RBP9.37□□□□□ -0.91
CLN8-202ENST00000517514 SEMA3DO95025 777 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 SNUPNO95149 360 aaKnown RBP9.37□□□□□ -0.91
CLN8-202ENST00000517514 SCELO95171 688 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 SLC35G6P0C7Q6 338 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 PRR35P0CG20 571 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 KITP10721 976 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 HSD3B1P14060 373 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 ALOX15P16050 662 aaPredicted RBP9.37□□□□□ -0.91
CLN8-202ENST00000517514 ALOX12P18054 663 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 PRPH2P23942 346 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 ATP5A1P25705 553 aaKnown RBP9.37□□□□□ -0.91
CLN8-202ENST00000517514 HSD3B2P26439 372 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 HK2P52789 917 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 PLA2G16P53816 162 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 FOXL2P58012 376 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 RGS1Q08116 209 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 PDCD2Q16342 344 aaPredicted RBP9.37□□□□□ -0.91
CLN8-202ENST00000517514 SYT16Q17RD7 645 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 MUM1Q2TAK8 710 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 DEFB134Q4QY38 66 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 C10orf62Q5T681 223 aaPredicted RBP9.37□□□□□ -0.91
CLN8-202ENST00000517514 VWA5B1Q5TIE3 1220 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 YOD1Q5VVQ6 348 aaPredicted RBP9.37□□□□□ -0.91
CLN8-202ENST00000517514 MRM1Q6IN84 353 aaKnown RBP9.37□□□□□ -0.91
CLN8-202ENST00000517514 FAM199XQ6PEV8 388 aaPredicted RBP9.37□□□□□ -0.91
CLN8-202ENST00000517514 RIPOR1Q6ZS17 1223 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 LRRC34Q8IZ02 419 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 GPR135Q8IZ08 494 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 METTL4Q8N3J2 472 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 TTC29Q8NA56 475 aaPredicted RBP9.37□□□□□ -0.91
CLN8-202ENST00000517514 GALNT6Q8NCL4 622 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 OR5T3Q8NGG3 340 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 N4BP2L2Q92802 583 aaPredicted RBP9.37□□□□□ -0.91
CLN8-202ENST00000517514 FCRL1Q96LA6 429 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 LRFN5Q96NI6 719 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 SERPINI1Q99574 410 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 C17orf62Q9BQA9 187 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 ZPBPQ9BS86 351 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 ASPSCR1Q9BZE9 553 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 ULBP3Q9BZM4 244 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 KCNK13Q9HB14 408 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 KCMF1Q9P0J7 381 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 ACSL6Q9UKU0 697 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 SLC12A4Q9UP95 1085 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 SRPK3Q9UPE1 567 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 NAALAD2Q9Y3Q0 740 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 MAU2Q9Y6X3 613 aa9.37□□□□□ -0.91
CLN8-202ENST00000517514 A0A0A6YYD5 115 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 A0A1B0GX78 115 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 ATP6AP2A0A1C7CYW4 349 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.36□□□□□ -0.91
CLN8-202ENST00000517514 MEN1O00255 615 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 LSM1O15116 133 aaKnown RBP9.36□□□□□ -0.91
CLN8-202ENST00000517514 POLR3GO15318 223 aaPredicted RBP9.36□□□□□ -0.91
CLN8-202ENST00000517514 HDAC3O15379 428 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 TMPRSS11DO60235 418 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 CPNE3O75131 537 aaKnown RBP9.36□□□□□ -0.91
CLN8-202ENST00000517514 RDH16O75452 317 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 ATP6AP2O75787 350 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 NSA2O95478 260 aaKnown RBP9.36□□□□□ -0.91
CLN8-202ENST00000517514 GBAP04062 536 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 CERS1P27544 350 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 TPP2P29144 1249 aaPredicted RBP9.36□□□□□ -0.91
CLN8-202ENST00000517514 ARSFP54793 590 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 STXBP1P61764 594 aaKnown RBP9.36□□□□□ -0.91
CLN8-202ENST00000517514 OLR1P78380 273 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 BTN3A2P78410 334 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms