RNA–Protein interactions for RNA: ENST00000516288.1

RNU6-346P-201, Transcript of RNA, U6 small nuclear 346, pseudogene, humanhuman

BASIC

Gene RNU6-346P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-346P-201ENST00000516288 HMGCLP35914 325 aa0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 PBX3P40426 434 aa0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 NT5C2P49902 561 aa0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 SLC26A2P50443 739 aa0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 SIRPAP78324 504 aa0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 HERPUD1Q15011 391 aa0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 LETM2Q2VYF4 491 aa0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 ZNF311Q5JNZ3 666 aa0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 SPANXN4Q5MJ08 99 aa0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 CTR9Q6PD62 1173 aa0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 CPEB2Q7Z5Q1 589 aaKnown RBP0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 NAA40Q86UY6 237 aa0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 TEX11Q8IYF3 940 aa0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 OR2L8Q8NGY9 312 aa0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 KCNK15Q9H427 330 aa0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 ZNF702PQ9H963 129 aa0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 Q9N2K0 584 aa0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 PLCB1Q9NQ66 1216 aa0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 IMPAD1Q9NX62 359 aa0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 EHD2Q9NZN4 543 aa0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 POLKQ9UBT6 870 aa0.11□□□□□ -2.39
RNU6-346P-201ENST00000516288 BRWD3Q6RI45 1802 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 IGLV8-61A0A075B6I0 122 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 FAM237BA0A1B0GVD1 139 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 LOC390937A0A1W2PQ73 354 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 ZSCAN5BA6NJL1 495 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 ZNF878C9JN71 531 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 RTCAO00442 366 aaKnown RBP0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 FRAT2O75474 233 aaPredicted RBP0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 TGDSO95455 350 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 PDGFBP01127 241 aaPredicted RBP0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 IGHV2-70P01814 119 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 UBL4AP11441 157 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 RNH1P13489 461 aaKnown RBP0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 ICAM3P32942 547 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 BSGP35613 385 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 LONP1P36776 959 aaKnown RBP0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 HTR3AP46098 478 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 CAMPP49913 170 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 GSTO1P78417 241 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 TLE2Q04725 743 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 IKQ13123 557 aaPredicted RBP0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 SRSF5Q13243 272 aaKnown RBP0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 SNTB1Q13884 538 aaKnown RBP0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 MCMDC2Q4G0Z9 681 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 NHSL2Q5HYW2 709 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 ABRAXAS1Q6UWZ7 409 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 TMPRSS11BQ86T26 416 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 CPOQ8IVL8 374 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 ARL14Q8N4G2 192 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 ZNF781Q8N8C0 355 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 LINC00304Q8N9R0 145 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 RNF149Q8NC42 400 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 OR4C15Q8NGM1 316 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 CCDC136Q96JN2 1154 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 FAM71F1Q96KD3 344 aaPredicted RBP0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 NMNAT2Q9BZQ4 307 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 GORASP2Q9H8Y8 452 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 ITM2CQ9NQX7 267 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 HACL1Q9UJ83 578 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 ZNF148Q9UQR1 794 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 RNF24Q9Y225 148 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 FBXO7Q9Y3I1 522 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 CACNG2Q9Y698 323 aa0.1□□□□□ -2.39
RNU6-346P-201ENST00000516288 EFCAB7A8K855 629 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 A8MVM7 634 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 MEIS2O14770 477 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 MCF2LO15068 1137 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 GJB5O95377 273 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 SLC35E2P0CK97 266 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 GABRR1P24046 479 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 GNALP38405 381 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 FEN1P39748 380 aaKnown RBP0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 GRK6P43250 576 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 TRPC3Q13507 836 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 QRICH1Q2TAL8 776 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 SPATA46Q5T0L3 261 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 TSPO2Q5TGU0 170 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 CYB5D1Q6P9G0 228 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 SARM1Q6SZW1 724 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 MACC1Q6ZN28 852 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 NOL8Q76FK4 1167 aaKnown RBP0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 ARMC8Q8IUR7 673 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 TBC1D10CQ8IV04 446 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 CCDC71LQ8N9Z2 235 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 XXYLT1Q8NBI6 393 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 ZNF596Q8TC21 504 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 SYN2Q92777 582 aaPredicted RBP0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 ARHGEF2Q92974 986 aaKnown RBP0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 MARC2Q969Z3 335 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 RMI2Q96E14 147 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 SFXN2Q96NB2 322 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 KLHL5Q96PQ7 755 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 NRTNQ99748 197 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 PRRG4Q9BZD6 226 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 PPIL3Q9H2H8 161 aaKnown RBP0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 LIME1Q9H400 295 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 NXF3Q9H4D5 531 aaKnown RBP0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 EHD1Q9H4M9 534 aa0.09□□□□□ -2.4
RNU6-346P-201ENST00000516288 ABCC13Q9NSE7 274 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms