RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ZC3H7AQ8IWR0 971 aaKnown RBP13.2□□□□□ -0.3
USP46-209ENST00000514536 BANPQ8N9N5 519 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 L3MBTL4Q8NA19 623 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 CCDC63Q8NA47 563 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 TRPC4APQ8TEL6 797 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 GAL3ST3Q96A11 431 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 ZIM3Q96PE6 472 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 F2RL3Q96RI0 385 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 CRB3Q9BUF7 120 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 NTMT1Q9BV86 223 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 C1QTNF3Q9BXJ4 246 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 TGIF2Q9GZN2 237 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 REXO4Q9GZR2 422 aaKnown RBP13.2□□□□□ -0.3
USP46-209ENST00000514536 C14orf105Q9NVL8 296 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 C3orf18Q9UK00 162 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 PCDHGA11Q9Y5H2 935 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 CCDC151A5D8V7 595 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 ARGFXA6NJG6 315 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 CHST10O43529 356 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 BMP10O95393 424 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 TGFB1P01137 390 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 FAM87AP0C7U9 286 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 MMP11P24347 488 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 XCR1P46094 333 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 SKP1P63208 163 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 CLCQ05315 142 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 CHAF1BQ13112 559 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 ZRSR2Q15696 482 aaKnown RBP13.2□□□□□ -0.3
USP46-209ENST00000514536 CEP85LQ5SZL2 805 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 ZYG11AQ6WRX3 759 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 MRGPREQ86SM8 312 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 RNF175Q8N4F7 328 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 EXD3Q8N9H8 876 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 HUS1BQ8NHY5 278 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 PEX11GQ96HA9 241 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 FAR2Q96K12 515 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 IP6K3Q96PC2 410 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 TMEM237Q96Q45 408 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 SEMA3GQ9NS98 782 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 P4HTMQ9NXG6 502 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 ADGRE2Q9UHX3 823 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 MKL2Q9ULH7 1088 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 A0A1B0GTL3 188 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 IDSB3KWA1 339 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 H0YIV9 168 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 PEX12O00623 359 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 ATXN7O15265 892 aaPredicted RBP13.19□□□□□ -0.3
USP46-209ENST00000514536 RGS16O15492 202 aaPredicted RBP13.19□□□□□ -0.3
USP46-209ENST00000514536 SPAG7O75391 227 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 IGHEP01854 428 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 HEXBP07686 556 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 CPA3P15088 417 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 CREB1P16220 341 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 HPDP32754 393 aaPredicted RBP13.19□□□□□ -0.3
USP46-209ENST00000514536 NEK2P51955 445 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 POLE2P56282 527 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 TRAF3Q13114 568 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 LY6DQ14210 128 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 ADPRMQ3LIE5 342 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 BEND6Q5SZJ8 279 aaPredicted RBP13.19□□□□□ -0.3
USP46-209ENST00000514536 MFSD4BQ5TF39 518 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 CPZQ66K79 652 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 FAAH2Q6GMR7 532 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 NIPAL1Q6NVV3 410 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 CCNYL1Q8N7R7 359 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 OR2L5Q8NG80 312 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 OR4F6Q8NGB9 312 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 REPS1Q96D71 796 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 MTFMTQ96DP5 389 aaKnown RBP13.19□□□□□ -0.3
USP46-209ENST00000514536 CCDC126Q96EE4 140 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 WBP1Q96G27 269 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 APOPT1Q96IL0 206 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 MTERF1Q99551 399 aaKnown RBP13.19□□□□□ -0.3
USP46-209ENST00000514536 MESP1Q9BRJ9 268 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 MS4A8Q9BY19 250 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 IQCGQ9H095 443 aaKnown RBP13.19□□□□□ -0.3
USP46-209ENST00000514536 ING2Q9H160 280 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 OR51B5Q9H339 312 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 CENPHQ9H3R5 247 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 PLLPQ9Y342 182 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 HS3ST3B1Q9Y662 390 aa13.19□□□□□ -0.3
USP46-209ENST00000514536 SCN3AQ9NY46 2000 aa13.18□□□□□ -0.3
USP46-209ENST00000514536 MGAQ8IWI9 3026 aa13.18□□□□□ -0.3
USP46-209ENST00000514536 OR2W5A6NFC9 320 aa13.18□□□□□ -0.3
USP46-209ENST00000514536 MASP2O00187 686 aa13.18□□□□□ -0.3
USP46-209ENST00000514536 SOCS6O14544 535 aa13.18□□□□□ -0.3
USP46-209ENST00000514536 DNAJB5O75953 348 aa13.18□□□□□ -0.3
USP46-209ENST00000514536 OTCP00480 354 aa13.18□□□□□ -0.3
USP46-209ENST00000514536 SERPINB1P30740 379 aa13.18□□□□□ -0.3
USP46-209ENST00000514536 PIK3CBP42338 1070 aa13.18□□□□□ -0.3
USP46-209ENST00000514536 CCL11P51671 97 aa13.18□□□□□ -0.3
USP46-209ENST00000514536 MINDY4Q4G0A6 757 aa13.18□□□□□ -0.3
USP46-209ENST00000514536 TTC19Q6DKK2 380 aaPredicted RBP13.18□□□□□ -0.3
USP46-209ENST00000514536 TRIM40Q6P9F5 258 aa13.18□□□□□ -0.3
USP46-209ENST00000514536 ABHD17CQ6PCB6 329 aa13.18□□□□□ -0.3
USP46-209ENST00000514536 KIRREL2Q6UWL6 708 aa13.18□□□□□ -0.3
USP46-209ENST00000514536 CHSY3Q70JA7 882 aa13.18□□□□□ -0.3
USP46-209ENST00000514536 MED25Q71SY5 747 aa13.18□□□□□ -0.3
USP46-209ENST00000514536 UBE3DQ7Z6J8 389 aa13.18□□□□□ -0.3
USP46-209ENST00000514536 ARMC2Q8NEN0 867 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms