RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 G3V2T6 193 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 CDK2AP1O14519 115 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 EPN2O95208 641 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 MOCS2O96007 188 aaPredicted RBP7.13□□□□□ -1.27
CLIP1-205ENST00000514271 NCF1P14598 390 aaPredicted RBP7.13□□□□□ -1.27
CLIP1-205ENST00000514271 CTRB1P17538 263 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 AVPR2P30518 371 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 CXCL12P48061 93 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 ERVPABLB-1P60509 514 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 CAMK2GQ13555 558 aaPredicted RBP7.13□□□□□ -1.27
CLIP1-205ENST00000514271 UBXN2BQ14CS0 331 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 MLC1Q15049 377 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 CDKN3Q16667 212 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 MICAQ29983 383 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 PGS1Q32NB8 556 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 CTRB2Q6GPI1 263 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 CD200R1LQ6Q8B3 271 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 SERPINA11Q86U17 422 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 DNAJC22Q8N4W6 341 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 C7orf57Q8NEG2 295 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 DUSP18Q8NEJ0 188 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 CNIH3Q8TBE1 160 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 AGR3Q8TD06 166 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 PPP1R16AQ96I34 528 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 EPYCQ99645 322 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.13□□□□□ -1.27
CLIP1-205ENST00000514271 SLC25A51Q9H1U9 297 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 MIXL1Q9H2W2 232 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 TMEM184CQ9NVA4 438 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 GALPQ9UBC7 116 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 OR51B4Q9Y5P0 310 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 TRANK1O15050 2925 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 C1orf232A0A0U1RR37 186 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.12□□□□□ -1.27
CLIP1-205ENST00000514271 AGAP14A8MT82 685 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 WASH3PC4AMC7 463 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 TAPBPO15533 448 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 MT-ND2P03891 347 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 CDK1P06493 297 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 ATF4P18848 351 aaPredicted RBP7.12□□□□□ -1.27
CLIP1-205ENST00000514271 KIR2DL1P43626 348 aaPredicted RBP7.12□□□□□ -1.27
CLIP1-205ENST00000514271 MAP2K4P45985 399 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 STC1P52823 247 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 IST1P53990 364 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 CRISP3P54108 245 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 LMAN2Q12907 356 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 RFX4Q33E94 735 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 CXorf57Q6NSI4 855 aaKnown RBP7.12□□□□□ -1.27
CLIP1-205ENST00000514271 CRTC1Q6UUV9 634 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 SBSNQ6UWP8 590 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 AKAP14Q86UN6 197 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 SLC38A6Q8IZM9 456 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 TMIEQ8NEW7 156 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 ZFAND1Q8TCF1 268 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 RAB7BQ96AH8 199 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 TESCQ96BS2 214 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 PPP1R36Q96LQ0 422 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 PHOX2BQ99453 314 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 SLC39A8Q9C0K1 460 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 KCMF1Q9P0J7 381 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 BAG5Q9UL15 447 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 FZD4Q9ULV1 537 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 SF3B6Q9Y3B4 125 aaKnown RBP7.12□□□□□ -1.27
CLIP1-205ENST00000514271 IQCMA0A1B0GVH7 501 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 HMX3A6NHT5 357 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 EPOP01588 193 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 OR1E1P30953 314 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 KCNJ10P78508 379 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 GPLD1P80108 840 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 SLC13A2Q13183 592 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 BOP1Q14137 746 aaKnown RBP7.12□□□□□ -1.27
CLIP1-205ENST00000514271 FAM83EQ2M2I3 478 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 MAJINQ3KP22 176 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 ZNF404Q494X3 552 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 GLYATQ6IB77 296 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 NEK5Q6P3R8 708 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 RFPL4BQ6ZWI9 263 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 SPATC1Q76KD6 591 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 ASPGQ86U10 573 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 P2RY8Q86VZ1 359 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 GRAMD2AQ8IUY3 354 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 SPERTQ8NA61 448 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 GOT1L1Q8NHS2 421 aaPredicted RBP7.12□□□□□ -1.27
CLIP1-205ENST00000514271 NUDT8Q8WV74 236 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 FCGR1BQ92637 280 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 ALG14Q96F25 216 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 NSMCE2Q96MF7 247 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 SLC6A18Q96N87 628 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 DEPDC7Q96QD5 511 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 KCTD14Q9BQ13 255 aaPredicted RBP7.12□□□□□ -1.27
CLIP1-205ENST00000514271 ZSCAN32Q9NX65 697 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 PADI2Q9Y2J8 665 aa7.12□□□□□ -1.27
CLIP1-205ENST00000514271 A6NL46 340 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 K7EQS6 105 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 PLOD3O60568 738 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 LRP3O75074 770 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 SLC22A3O75751 556 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 SCELO95171 688 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 PRLP01236 227 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 PRNPP04156 253 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms