RNA–Protein interactions for RNA: ENST00000513858.5

SEC31A-237, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC31A, Length 3,687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-237ENST00000513858 TMEM102Q8N9M5 508 aaPredicted RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 OR2L3Q8NG85 312 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 GOT1L1Q8NHS2 421 aaPredicted RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 WDR48Q8TAF3 677 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 UCN3Q969E3 161 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 RAD51AP1Q96B01 352 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 ZNF764Q96H86 408 aaPredicted RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 HIST1H2AHQ96KK5 128 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 MAGEB10Q96LZ2 347 aaPredicted RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 C12orf66Q96MD2 445 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 ZNF583Q96ND8 569 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 RAB3IPQ96QF0 476 aaPredicted RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 NELL2Q99435 816 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 HIST1H2AJQ99878 128 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 H2AFJQ9BTM1 129 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 ASPSCR1Q9BZE9 553 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 TPSD1Q9BZJ3 242 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 ACTR8Q9H981 624 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 NANOGQ9H9S0 305 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 SPAG4Q9NPE6 437 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 SLAMF7Q9NQ25 335 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 STX18Q9P2W9 335 aaKnown RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 VPS29Q9UBQ0 182 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 TAC3Q9UHF0 121 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 SNX6Q9UNH7 406 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 LY6G6EA0A0G2JKS1 128 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 FEZF1A0PJY2 475 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 NR5A2O00482 541 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 CASC3O15234 703 aaKnown RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 NOBOXO60393 691 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 GUCY1B2O75343 617 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 GCM2O75603 506 aaPredicted RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 LMNAP02545 664 aaKnown RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 CSF2P04141 144 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 PGRP06401 933 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 SMIM10L1P0DMW3 83 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 F3P13726 295 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 FUT4P22083 530 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 IDSP22304 550 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 OXTRP30559 389 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 PSME3P61289 254 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 PPP1CAP62136 330 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 RPS13P62277 151 aaKnown RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 HPCAP84074 193 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 GTF2H3Q13889 308 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 SIM2Q14190 667 aaPredicted RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 SLBPQ14493 270 aaKnown RBP eCLIP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 NR1D2Q14995 579 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 NR6A1Q15406 480 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 TRMT5Q32P41 509 aaKnown RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 IQCCQ4KMZ1 466 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 TIGD2Q4W5G0 525 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 C10orf62Q5T681 223 aaPredicted RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 SIGIRRQ6IA17 410 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 FAM71E1Q6IPT2 247 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 HMBOX1Q6NT76 420 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 CORO6Q6QEF8 472 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 ENPP7Q6UWV6 458 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 TMPRSS11BQ86T26 416 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 IQCHQ86VS3 1027 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 PAQR7Q86WK9 346 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 CROCCP3Q8IVE0 287 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 TBC1D20Q96BZ9 403 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 SMIM10Q96HG1 83 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 CCDC115Q96NT0 180 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 TEFMQ96QE5 360 aaKnown RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 CDRT15Q96T59 188 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 CPPED1Q9BRF8 314 aaPredicted RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 INPP5KQ9BT40 448 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 SORBS1Q9BX66 1292 aaKnown RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 TRIM54Q9BYV2 358 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 PCDHAC1Q9H158 963 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 PCED1AQ9H1Q7 454 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 TRIT1Q9H3H1 467 aaKnown RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 XKR8Q9H6D3 395 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 EPS8L2Q9H6S3 715 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 KAT8Q9H7Z6 458 aaKnown RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 EFCAB1Q9HAE3 211 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 FAIMQ9NVQ4 179 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 U3KQA8 63 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 FER1L5A0AVI2 2057 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 A0A0J9YVX5 310 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 LOC105371267A0A1B0GV96 52 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 OR2A25A4D2G3 310 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 LRRC72A6NJI9 287 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 GABRR3A8MPY1 467 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 CACNB4O00305 520 aaPredicted RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 MRASO14807 208 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 SCAMP2O15127 329 aaKnown RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 CTSVO60911 334 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 ZNF217O75362 1048 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 SCELO95171 688 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 PAHP00439 452 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 KRT6AP02538 564 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 KRT6BP04259 564 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 CTSBP07858 339 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 CHRM5P08912 532 aaPredicted RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 ACADMP11310 421 aa4.39□□□□□ -1.71
SEC31A-237ENST00000513858 NME1P15531 152 aaKnown RBP4.39□□□□□ -1.71
SEC31A-237ENST00000513858 ACADSP16219 412 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms