RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 TTTY12Q9BZ98 90 aa10.4□□□□□ -0.74
RNF4-218ENST00000513284 PAK5Q9P286 719 aa10.4□□□□□ -0.74
RNF4-218ENST00000513284 TRPS1Q9UHF7 1281 aa10.4□□□□□ -0.74
RNF4-218ENST00000513284 ZNF148Q9UQR1 794 aa10.4□□□□□ -0.74
RNF4-218ENST00000513284 REXO2Q9Y3B8 237 aaKnown RBP10.4□□□□□ -0.74
RNF4-218ENST00000513284 NAALAD2Q9Y3Q0 740 aa10.4□□□□□ -0.74
RNF4-218ENST00000513284 TRIM64A6NGJ6 449 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 TRIM64BA6NI03 449 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 FIGNL2A6NMB9 653 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 A8MUA0 341 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 PRKNO60260 465 aaPredicted RBP10.39□□□□□ -0.75
RNF4-218ENST00000513284 CRLF1O75462 422 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 PSIP1O75475 530 aaKnown RBP10.39□□□□□ -0.75
RNF4-218ENST00000513284 ITGA10O75578 1167 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 SLC16A8O95907 504 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 HRGP04196 525 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 FHP07954 510 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 ENDOUP21128 410 aaKnown RBP10.39□□□□□ -0.75
RNF4-218ENST00000513284 IL10P22301 178 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 PEX19P40855 299 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 MAGEA5P43359 124 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 GPR143P51810 404 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 GDF10P55107 478 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 ABATP80404 500 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 FOXO1Q12778 655 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 ARHGAP19Q14CB8 494 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 CTSL3PQ5NE16 218 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 Q5PR19 223 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 C4orf22Q6V702 233 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 OTOAQ7RTW8 1153 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 LRRC6Q86X45 466 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 MPP5Q8N3R9 675 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 AFAP1L2Q8N4X5 818 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 TMEM251Q8N6I4 163 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 PSD4Q8NDX1 1056 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 SIMC1Q8NDZ2 872 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 ZCCHC10Q8TBK6 192 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 MCOLN3Q8TDD5 553 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 KIAA1191Q96A73 305 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 Q96MF0 132 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 BIRC8Q96P09 236 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 OR1F2PQ96R84 312 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 TSGA10Q9BZW7 698 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 LACRTQ9GZZ8 138 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 ATG10Q9H0Y0 220 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 LIN28AQ9H9Z2 209 aaKnown RBP10.39□□□□□ -0.75
RNF4-218ENST00000513284 ETNK1Q9HBU6 452 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 ANKHQ9HCJ1 492 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 RAB6BQ9NRW1 208 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 CATSPERZQ9NTU4 200 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 SPRR3Q9UBC9 169 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 PACSIN2Q9UNF0 486 aaPredicted RBP10.39□□□□□ -0.75
RNF4-218ENST00000513284 TCAF1Q9Y4C2 921 aa10.39□□□□□ -0.75
RNF4-218ENST00000513284 ARID1AO14497 2285 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 ARHGAP21Q5T5U3 1957 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 KIAA1549Q9HCM3 1950 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 IGKV3D-11A0A0A0MRZ8 115 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 SAGE2PA6NJ88 616 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 G3V3Y1 287 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 AQP7O14520 342 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 FCHO1O14526 889 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 CHST10O43529 356 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 KIF5CO60282 957 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 B4GALT2O60909 372 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 WDR1O75083 606 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 NDUFS3O75489 264 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 FTCDO95954 541 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 TUBB4AP04350 444 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 APRTP07741 180 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 COILP38432 576 aaPredicted RBP10.38□□□□□ -0.75
RNF4-218ENST00000513284 OLR1P78380 273 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 KCNJ11Q14654 390 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 ACSBG2Q5FVE4 666 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 PCID2Q5JVF3 399 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 ADCK2Q7Z695 626 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 SLC26A11Q86WA9 606 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 TMEM139Q8IV31 216 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 RNF10Q8N5U6 811 aaKnown RBP10.38□□□□□ -0.75
RNF4-218ENST00000513284 TMEM156Q8N614 296 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 OTUD6BQ8N6M0 293 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 ARMC2Q8NEN0 867 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 TBC1D20Q96BZ9 403 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 FAM136AQ96C01 138 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 PTCHD1Q96NR3 888 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 TIMMDC1Q9NPL8 285 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 SEMA4BQ9NPR2 832 aaPredicted RBP10.38□□□□□ -0.75
RNF4-218ENST00000513284 NECTIN3Q9NQS3 549 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 ABCF3Q9NUQ8 709 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 TMEM184CQ9NVA4 438 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 ALKBH4Q9NXW9 302 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 UTP6Q9NYH9 597 aaKnown RBP10.38□□□□□ -0.75
RNF4-218ENST00000513284 ACAD8Q9UKU7 415 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 SH2B3Q9UQQ2 575 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 SLC22A7Q9Y694 548 aa10.38□□□□□ -0.75
RNF4-218ENST00000513284 TRBV11-1A0A0K0K1C0 115 aa10.37□□□□□ -0.75
RNF4-218ENST00000513284 TCRBV16S1A1N1A0A5B0 115 aa10.37□□□□□ -0.75
RNF4-218ENST00000513284 TUBAL3A6NHL2 446 aa10.37□□□□□ -0.75
RNF4-218ENST00000513284 CLCA1A8K7I4 914 aa10.37□□□□□ -0.75
RNF4-218ENST00000513284 RNF212BA8MTL3 300 aa10.37□□□□□ -0.75
RNF4-218ENST00000513284 H3BMM5 538 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms