RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 PTK6Q13882 451 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 KCNJ11Q14654 390 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 TRIP13Q15645 432 aaPredicted RBP6.79□□□□□ -1.32
USP46-208ENST00000512656 KRTAP19-4Q3LI73 84 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 LCE1DQ5T752 114 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 MFSD4BQ5TF39 518 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 ZNF324BQ6AW86 544 aaPredicted RBP6.79□□□□□ -1.32
USP46-208ENST00000512656 UGT3A1Q6NUS8 523 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 HIBCHQ6NVY1 386 aaPredicted RBP6.79□□□□□ -1.32
USP46-208ENST00000512656 UBE2R2Q712K3 238 aaPredicted RBP6.79□□□□□ -1.32
USP46-208ENST00000512656 FJX1Q86VR8 437 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 ZC3H7AQ8IWR0 971 aaKnown RBP6.79□□□□□ -1.32
USP46-208ENST00000512656 AMER3Q8N944 861 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 PRELID2Q8N945 189 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 CAMKVQ8NCB2 501 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 PSMF1Q92530 271 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 RELTQ969Z4 430 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 ZNF669Q96BR6 464 aaPredicted RBP6.79□□□□□ -1.32
USP46-208ENST00000512656 MOCOSQ96EN8 888 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 PRAP1Q96NZ9 151 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 NAP1L3Q99457 506 aaPredicted RBP6.79□□□□□ -1.32
USP46-208ENST00000512656 LZTFL1Q9NQ48 299 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 CCDC177Q9NQR7 707 aaPredicted RBP6.79□□□□□ -1.32
USP46-208ENST00000512656 ABCF3Q9NUQ8 709 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 PLA2G3Q9NZ20 509 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 STMN3Q9NZ72 180 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 GALPQ9UBC7 116 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 COPG2Q9UBF2 871 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 DHRS7Q9Y394 339 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 DCHS2Q6V1P9 2916 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 KCNE1BA0A087WTH5 132 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 TCRBV7S3A2A0A539 114 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 A8MUI8 341 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 PRSS44E7EML9 344 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 FFAR3O14843 346 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 GPR42O15529 346 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 P2RX6O15547 441 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 PRAMEF2O60811 474 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 WDPCPO95876 746 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 C8GP07360 202 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 ITGAMP11215 1152 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 IL10P22301 178 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 CCND1P24385 295 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 TNFRSF8P28908 595 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 AGTR2P50052 363 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 TDGF1P3P51864 188 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 TERF1P54274 439 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 ZNF33BQ06732 778 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 CTBP1Q13363 440 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 CUL1Q13616 776 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 PCOLCEQ15113 449 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 EXT1Q16394 746 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 BTBD16Q32M84 506 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 MINDY4Q4G0A6 757 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 C1QL3Q5VWW1 255 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 SP5Q6BEB4 398 aaPredicted RBP6.78□□□□□ -1.32
USP46-208ENST00000512656 PLAG1Q6DJT9 500 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 NIPAL1Q6NVV3 410 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 RPTNQ6XPR3 784 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 CPEB2Q7Z5Q1 589 aaKnown RBP6.78□□□□□ -1.32
USP46-208ENST00000512656 CAND1Q86VP6 1230 aaKnown RBP6.78□□□□□ -1.32
USP46-208ENST00000512656 C17orf64Q86WR6 236 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 GAS2L3Q86XJ1 694 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 PLD3Q8IV08 490 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 DENND6AQ8IWF6 608 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 ARHGEF39Q8N4T4 335 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 TBC1D19Q8N5T2 526 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 HORMAD2Q8N7B1 307 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 PPFIBP2Q8ND30 876 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 MCUQ8NE86 351 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 OR9A4Q8NGU2 314 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 PIWIL2Q8TC59 973 aaKnown RBP6.78□□□□□ -1.32
USP46-208ENST00000512656 GRK7Q8WTQ7 553 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 MAGOHBQ96A72 148 aaKnown RBP6.78□□□□□ -1.32
USP46-208ENST00000512656 IMMP1LQ96LU5 166 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 ZNF354BQ96LW1 612 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 CCDC138Q96M89 665 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 TAAR6Q96RI8 345 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 CYTH2Q99418 400 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 GPR21Q99679 349 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 MESP1Q9BRJ9 268 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 FAM167BQ9BTA0 163 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 VN1R1Q9GZP7 353 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 ANKHQ9HCJ1 492 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 CHST11Q9NPF2 352 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 FBXO6Q9NRD1 293 aaPredicted RBP6.78□□□□□ -1.32
USP46-208ENST00000512656 C20orf96Q9NUD7 363 aaPredicted RBP6.78□□□□□ -1.32
USP46-208ENST00000512656 TAS2R13Q9NYV9 303 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 SEC14L3Q9UDX4 400 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 TRMT6Q9UJA5 497 aaKnown RBP6.78□□□□□ -1.32
USP46-208ENST00000512656 ADAM30Q9UKF2 790 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 FBXO5Q9UKT4 447 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 PCDHGB6Q9Y5F9 930 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 KLF2Q9Y5W3 355 aaPredicted RBP6.78□□□□□ -1.32
USP46-208ENST00000512656 MAD1L1Q9Y6D9 718 aa6.78□□□□□ -1.32
USP46-208ENST00000512656 SETD2Q9BYW2 2564 aaPredicted RBP6.77□□□□□ -1.33
USP46-208ENST00000512656 TRGV8A0A0C4DH27 118 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 ZCWPW2A0A1B0GU75 182 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 ARHGAP10A1A4S6 786 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 GOLGA8MH3BSY2 632 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms