RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 PCDHB7Q9Y5E2 793 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 V9GYQ6 96 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 MUC3AQ02505 3323 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 A0A0B4J293 547 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 TEX13CA0A0J9YWL9 993 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 PLSCR5A0PG75 271 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 FBLL1A6NHQ2 334 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 ANKDD1BA6NHY2 528 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 SH2D7A6NKC9 451 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 PDZK1P1A8MUH7 402 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 WASH4PA8MWX3 477 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 RFXAPO00287 272 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 FOXE1O00358 373 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 ITGB1BP1O14713 200 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 BCKDKO14874 412 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 PSMD3O43242 534 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 BUD23O43709 281 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 GDF9O60383 454 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRSS23O95084 383 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 GJB5O95377 273 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 AHSA1O95433 338 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 MAPTP10636 758 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 PCMT1P22061 227 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 DNASE1P24855 282 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 PON1P27169 355 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 TACR3P29371 465 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 VIPR1P32241 457 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 WNT3P56703 355 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 SPCS3P61009 180 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 RAB4BP61018 213 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 RAB11AP62491 216 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 CDC42EP1Q00587 391 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 ACSM1Q08AH1 577 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 FASTKD3Q14CZ7 662 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 HEPACAMQ14CZ8 416 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 RAB11BQ15907 218 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 AMZ1Q400G9 498 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 RABGAP1LQ5R372 815 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 PDZK1Q5T2W1 519 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 SEL1L2Q5TEA6 688 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 ATF7IP2Q5U623 682 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 IL23RQ5VWK5 629 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 BSPRYQ5W0U4 402 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 OR52E8Q6IFG1 317 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 TMEM182Q6ZP80 229 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 CENPVQ7Z7K6 275 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 NUDCD3Q8IVD9 361 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRSS58Q8IYP2 241 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 NOA1Q8NC60 698 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 PDZD8Q8NEN9 1154 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 CADM4Q8NFZ8 388 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 OR2L3Q8NG85 312 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 GRHL3Q8TE85 626 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 ARNTL2Q8WYA1 636 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 HAS2Q92819 552 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 C4orf36Q96KX1 117 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 LRR1Q96L50 414 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 FAM110AQ9BQ89 295 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 C7orf50Q9BRJ6 194 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 FTHL17Q9BXU8 183 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 GPR88Q9GZN0 384 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 CXCL16Q9H2A7 254 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRO3102Q9H379 93 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 METTL8Q9H825 291 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 ANKRA2Q9H9E1 313 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLC28A3Q9HAS3 691 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZNF160Q9HCG1 818 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 FAM105AQ9NUU6 356 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 RDH8Q9NYR8 311 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 TJP2Q9UDY2 1190 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 PISDQ9UG56 409 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 SCOCQ9UIL1 159 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 SIX4Q9UIU6 781 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 FBXL7Q9UJT9 491 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 YBX2Q9Y2T7 364 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZNF281Q9Y2X9 895 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 INSL6Q9Y581 213 aa4.83□□□□□ -1.64
TRAPPC11-208ENST00000511955 MN1Q10571 1320 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 MYO9BQ13459 2157 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 MTMR11A4FU01 709 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 MARCH11A6NNE9 402 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 ANKRD63C9JTQ0 380 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 F8VP50 259 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 SMLR1H3BR10 107 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLC30A4O14863 429 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 ANKRD28O15084 1053 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 OPHN1O60890 802 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 LY86O95711 162 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 FAM107AO95990 144 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 DHFRP00374 187 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 CELA3BP08861 270 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 STAG3L1P0CL83 205 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 CPA3P15088 417 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 CDH2P19022 906 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRPS1L1P21108 318 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 MSR1P21757 451 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 BMP8BP34820 402 aa4.82□□□□□ -1.64
TRAPPC11-208ENST00000511955 GGCXP38435 758 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms