RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 NOBOXO60393 691 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 TBX19O60806 448 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 PCNAP12004 261 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 PNLIPP16233 465 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 SDC1P18827 310 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 PEBP1P30086 187 aaKnown RBP8.7□□□□□ -1.02
NR1I3-228ENST00000511676 TIA1P31483 386 aaKnown RBP eCLIP8.7□□□□□ -1.02
NR1I3-228ENST00000511676 GPR3P46089 330 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 ZFP36L2P47974 494 aaKnown RBP8.7□□□□□ -1.02
NR1I3-228ENST00000511676 NUDT2P50583 147 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 SRSF11Q05519 484 aaKnown RBP8.7□□□□□ -1.02
NR1I3-228ENST00000511676 TGM3Q08188 693 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 ZNF763Q0D2J5 394 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 RIPK1Q13546 671 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 PWP1Q13610 501 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 TSTA3Q13630 321 aaPredicted RBP8.7□□□□□ -1.02
NR1I3-228ENST00000511676 SF1Q15637 639 aaKnown RBP8.7□□□□□ -1.02
NR1I3-228ENST00000511676 MMEL1Q495T6 779 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 C14orf28Q4W4Y0 310 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 C8orf82Q6P1X6 216 aaPredicted RBP8.7□□□□□ -1.02
NR1I3-228ENST00000511676 PAOXQ6QHF9 649 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 SPESP1Q6UW49 350 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 SCIMPQ6UWF3 145 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 ZNF438Q7Z4V0 828 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 R3HCC1LQ7Z5L2 792 aaKnown RBP8.7□□□□□ -1.02
NR1I3-228ENST00000511676 PAQR7Q86WK9 346 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 GATAD2AQ86YP4 633 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 RIMKLAQ8IXN7 391 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 C10orf67Q8IYJ2 551 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 LIX1Q8N485 282 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 ARL10Q8N8L6 244 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 MFSD9Q8NBP5 474 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 OR4E2Q8NGC2 313 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 FLVCR1-AS1Q8TAF5 88 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 LMX1AQ8TE12 382 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 MARK4Q96L34 752 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 TMEM74Q96NL1 305 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 OR2A14Q96R47 310 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 MTERF1Q99551 399 aaKnown RBP8.7□□□□□ -1.02
NR1I3-228ENST00000511676 PRPF18Q99633 342 aaKnown RBP8.7□□□□□ -1.02
NR1I3-228ENST00000511676 DPH7Q9BTV6 452 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 CADM1Q9BY67 442 aaKnown RBP8.7□□□□□ -1.02
NR1I3-228ENST00000511676 DPY30Q9C005 99 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 ROGDIQ9GZN7 287 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 ACTL8Q9H568 366 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 SLC6A20Q9NP91 592 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 MYNNQ9NPC7 610 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 ENAMQ9NRM1 1142 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 ACTR10Q9NZ32 417 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 CIDEBQ9UHD4 219 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 BCAP29Q9UHQ4 241 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 POMT2Q9UKY4 750 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 SH2B3Q9UQQ2 575 aa8.7□□□□□ -1.02
NR1I3-228ENST00000511676 POLR3HQ9Y535 204 aaPredicted RBP8.7□□□□□ -1.02
NR1I3-228ENST00000511676 KNL1Q8NG31 2342 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 A0A0J9YY10 115 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 LOC100653049A0A140TA62 436 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 FAM149AA5PLN7 773 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 URADA6NGE7 173 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 CCDC154A6NI56 674 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 ISM1B1AKI9 464 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 H7BY64 318 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 BTN3A3O00478 584 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 NR5A2O00482 541 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 BRINP1O60477 761 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 GUCY1B2O75343 617 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 KRT34O76011 436 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 SCELO95171 688 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 UGT2B7P16662 529 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 ITGAXP20702 1163 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 PSMB5P28074 263 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 PGM1P36871 562 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 HPCAL1P37235 193 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 GRIA3P42263 894 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 CAPZBP47756 277 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 NEK2P51955 445 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 STXBP1P61764 594 aaKnown RBP8.69□□□□□ -1.02
NR1I3-228ENST00000511676 RPS13P62277 151 aaKnown RBP8.69□□□□□ -1.02
NR1I3-228ENST00000511676 CXADRP78310 365 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 GPLD1P80108 840 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 VAC14Q08AM6 782 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 ART3Q13508 389 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 ZIC1Q15915 447 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 CLPPQ16740 277 aaPredicted RBP8.69□□□□□ -1.02
NR1I3-228ENST00000511676 TRMT5Q32P41 509 aaKnown RBP8.69□□□□□ -1.02
NR1I3-228ENST00000511676 PROX2Q3B8N5 592 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 SGO1Q5FBB7 561 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 WASHC2DQ5SRD0 308 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 C6orf163Q5TEZ5 329 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 TMEM164Q5U3C3 297 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 REP15Q6BDI9 236 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 NIPAL1Q6NVV3 410 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 ARMC6Q6NXE6 501 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 PGM2L1Q6PCE3 622 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 BNC2Q6ZN30 1099 aaPredicted RBP8.69□□□□□ -1.02
NR1I3-228ENST00000511676 RINLQ6ZS11 566 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 GK5Q6ZS86 529 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 RNF44Q7L0R7 432 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 COMMD6Q7Z4G1 85 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 VN1R5Q7Z5H4 357 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms