RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 RHBGQ9H310 441 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 NT5DC2Q9H857 520 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 SEMA3GQ9NS98 782 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 NXT1Q9UKK6 140 aaKnown RBP12.8□□□□□ -0.36
SNF8-206ENST00000509989 EMCNQ9ULC0 261 aa12.8□□□□□ -0.36
SNF8-206ENST00000509989 IGHV1-45A0A0A0MS14 117 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 MYOCOSA0A1B0GUC4 107 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 A8MT66 165 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 TGFBR3LH3BV60 316 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 PEX12O00623 359 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 ERI3O43414 337 aaKnown RBP12.79□□□□□ -0.36
SNF8-206ENST00000509989 B4GALT2O60909 372 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 TGFB1P01137 390 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 CD63P08962 238 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 PYGBP11216 843 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 PCNAP12004 261 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 CNTFP26441 200 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 CERS1P27544 350 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 CASP2P42575 452 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 NEK2P51955 445 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 PLA2G16P53816 162 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 RHAGQ02094 409 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 GTF2H2Q13888 395 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 TUBB8Q3ZCM7 444 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 MINDY4Q4G0A6 757 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 MFSD4BQ5TF39 518 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 GTF2H2CQ6P1K8 395 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 ZNF793Q6ZN11 406 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 RBMXL3Q8N7X1 1067 aaKnown RBP12.79□□□□□ -0.36
SNF8-206ENST00000509989 EIF1ADQ8N9N8 165 aaKnown RBP12.79□□□□□ -0.36
SNF8-206ENST00000509989 TRPV3Q8NET8 790 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 AENQ8WTP8 325 aaKnown RBP12.79□□□□□ -0.36
SNF8-206ENST00000509989 ZNF473Q8WTR7 871 aaKnown RBP12.79□□□□□ -0.36
SNF8-206ENST00000509989 PSMF1Q92530 271 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 MS4A8Q9BY19 250 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 EPN3Q9H201 632 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 EHD1Q9H4M9 534 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 IPPKQ9H8X2 491 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 PRDM7Q9NQW5 492 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 GPR83Q9NYM4 423 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 PSMC3IPQ9P2W1 217 aaPredicted RBP12.79□□□□□ -0.36
SNF8-206ENST00000509989 PCTPQ9UKL6 214 aa12.79□□□□□ -0.36
SNF8-206ENST00000509989 BAHCC1Q9P281 2608 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 LOC102723996A0A087X1L8 192 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 SYCE1LA8MT33 242 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 SLC28A2O43868 658 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 DLX3O60479 287 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 CLEC3AO75596 197 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 SEC24DO94855 1032 aaPredicted RBP12.78□□□□□ -0.36
SNF8-206ENST00000509989 ETHE1O95571 254 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 ACPPP15309 386 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 EPB42P16452 691 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 MAOAP21397 527 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 ITGA3P26006 1051 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 CDH13P55290 713 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 PCDH1Q08174 1060 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 TRAF3Q13114 568 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 DDX39BQ13838 428 aaKnown RBP12.78□□□□□ -0.36
SNF8-206ENST00000509989 HERC3Q15034 1050 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 TBCCQ15814 346 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 ADPRMQ3LIE5 342 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 PRR30Q53SZ7 412 aaPredicted RBP12.78□□□□□ -0.36
SNF8-206ENST00000509989 KLC3Q6P597 504 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 TAOK1Q7L7X3 1001 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 CCDC91Q7Z6B0 441 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 ANKRD37Q7Z713 158 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 ZNF605Q86T29 641 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 LAS2Q8IYD9 372 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 KRT78Q8N1N4 520 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 OR7G3Q8NG95 312 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 MTFMTQ96DP5 389 aaKnown RBP12.78□□□□□ -0.36
SNF8-206ENST00000509989 THOC3Q96J01 351 aaKnown RBP12.78□□□□□ -0.36
SNF8-206ENST00000509989 CSF3RQ99062 836 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 EFCAB11Q9BUY7 163 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 OR51B5Q9H339 312 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 NOL11Q9H8H0 719 aaKnown RBP12.78□□□□□ -0.36
SNF8-206ENST00000509989 SEMA4BQ9NPR2 832 aaPredicted RBP12.78□□□□□ -0.36
SNF8-206ENST00000509989 ATP13A2Q9NQ11 1180 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 NECTIN3Q9NQS3 549 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 C14orf105Q9NVL8 296 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 ZNF225Q9UK10 706 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 PCDHGA9Q9Y5G4 932 aaKnown RBP12.78□□□□□ -0.36
SNF8-206ENST00000509989 CLDN16Q9Y5I7 305 aa12.78□□□□□ -0.36
SNF8-206ENST00000509989 ANKDD1BA6NHY2 528 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 PRPF4O43172 522 aaKnown RBP eCLIP12.77□□□□□ -0.37
SNF8-206ENST00000509989 ZIC2O95409 532 aaPredicted RBP12.77□□□□□ -0.37
SNF8-206ENST00000509989 HPP00738 406 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 IGHEP01854 428 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 FHP07954 510 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 RPS17P08708 135 aaKnown RBP12.77□□□□□ -0.37
SNF8-206ENST00000509989 RBP1P09455 135 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 ITGAMP11215 1152 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 SFTPCP11686 197 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 COL6A2P12110 1019 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 CXCR2P25025 360 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 PPP2R1BP30154 601 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 PGDP52209 483 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 RRADP55042 308 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 MLLT10P55197 1068 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 SOX8P57073 446 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms