RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 NT5CQ8TCD5 201 aa12.5□□□□□ -0.41
DDX41-210ENST00000509576 NRGNQ92686 78 aa12.5□□□□□ -0.41
DDX41-210ENST00000509576 NEIL2Q969S2 332 aa12.5□□□□□ -0.41
DDX41-210ENST00000509576 SDCCAG3Q96C92 435 aa12.5□□□□□ -0.41
DDX41-210ENST00000509576 LINGO1Q96FE5 620 aa12.5□□□□□ -0.41
DDX41-210ENST00000509576 OLFM1Q99784 485 aa12.5□□□□□ -0.41
DDX41-210ENST00000509576 VKORC1Q9BQB6 163 aa12.5□□□□□ -0.41
DDX41-210ENST00000509576 UCK2Q9BZX2 261 aa12.5□□□□□ -0.41
DDX41-210ENST00000509576 SLC6A16Q9GZN6 736 aa12.5□□□□□ -0.41
DDX41-210ENST00000509576 RUBCNLQ9H714 662 aa12.5□□□□□ -0.41
DDX41-210ENST00000509576 PLSCR2Q9NRY7 297 aa12.5□□□□□ -0.41
DDX41-210ENST00000509576 VPS9D1Q9Y2B5 631 aa12.5□□□□□ -0.41
DDX41-210ENST00000509576 TRBC2A0A5B9 178 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 NKX2-6A6NCS4 301 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 PFDN6O15212 129 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 HS6ST1O60243 411 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 C8GP07360 202 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 ABOP16442 354 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 ZNF24P17028 368 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 SSTR2P30874 369 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 MEOX1P50221 254 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 HLCSP50747 726 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 GPR85P60893 370 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 RAB8AP61006 207 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 REEP5Q00765 189 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 ACTN3Q08043 901 aaPredicted RBP12.49□□□□□ -0.41
DDX41-210ENST00000509576 PPP1R3AQ16821 1122 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 SBSNQ6UWP8 590 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 MEX3BQ6ZN04 569 aaKnown RBP12.49□□□□□ -0.41
DDX41-210ENST00000509576 QSOX2Q6ZRP7 698 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 CD163Q86VB7 1156 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 TXLNBQ8N3L3 684 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 OR52N2Q8NGI0 321 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 MCOLN3Q8TDD5 553 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 CREB3L4Q8TEY5 395 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 SNF8Q96H20 258 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 PWWP2AQ96N64 755 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 TSNARE1Q96NA8 513 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 PTCHD1Q96NR3 888 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 LIN28AQ9H9Z2 209 aaKnown RBP12.49□□□□□ -0.41
DDX41-210ENST00000509576 MCCC2Q9HCC0 563 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 XAB2Q9HCS7 855 aaKnown RBP12.49□□□□□ -0.41
DDX41-210ENST00000509576 SAMD15Q9P1V8 674 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 TRMT6Q9UJA5 497 aaKnown RBP12.49□□□□□ -0.41
DDX41-210ENST00000509576 PPT2Q9UMR5 302 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 COMMD10Q9Y6G5 202 aa12.49□□□□□ -0.41
DDX41-210ENST00000509576 ZNF354AO60765 605 aaPredicted RBP12.48□□□□□ -0.41
DDX41-210ENST00000509576 PRAMEF4O60810 478 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 SLC35G6P0C7Q6 338 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 HNF4AP41235 474 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 CCR8P51685 355 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 CASP6P55212 293 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 SP140Q13342 867 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 PWP1Q13610 501 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 RUNX2Q13950 521 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 HERC3Q15034 1050 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 C18orf21Q32NC0 220 aaPredicted RBP12.48□□□□□ -0.41
DDX41-210ENST00000509576 RNASEH2BQ5TBB1 312 aaKnown RBP12.48□□□□□ -0.41
DDX41-210ENST00000509576 PRAMEF9Q5VWM5 478 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 ADNP2Q6IQ32 1131 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 TRMT10BQ6PF06 316 aaKnown RBP12.48□□□□□ -0.41
DDX41-210ENST00000509576 CNTN4Q8IWV2 1026 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 CYP4X1Q8N118 509 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 CA13Q8N1Q1 262 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.48□□□□□ -0.41
DDX41-210ENST00000509576 C16orf52Q8NHV5 167 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 FAM57AQ8TBR7 257 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 SREK1Q8WXA9 508 aaKnown RBP12.48□□□□□ -0.41
DDX41-210ENST00000509576 PCBD2Q9H0N5 130 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 CCDC68Q9H2F9 335 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 ZFATQ9P243 1243 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 MAD1L1Q9Y6D9 718 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 NINQ8N4C6 2090 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 NAV3Q8IVL0 2385 aa12.48□□□□□ -0.41
DDX41-210ENST00000509576 A0A0G2JN53 185 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 MAGEB16A2A368 324 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 SLC16A5O15375 505 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 PRMT3O60678 531 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 TOXO94900 526 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 SERPIND1P05546 499 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 TFEBP19484 476 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 CYB561P49447 251 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 CCZ1BP86790 482 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 CCZ1P86791 482 aaPredicted RBP12.47□□□□□ -0.41
DDX41-210ENST00000509576 XKR6Q5GH73 641 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 DUPD1Q68J44 220 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 CEP128Q6ZU80 1094 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 VN1R5Q7Z5H4 357 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 STRA8Q7Z7C7 330 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 CCDC71Q8IV32 467 aaPredicted RBP12.47□□□□□ -0.41
DDX41-210ENST00000509576 SCUBE1Q8IWY4 988 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 MAIP1Q8WWC4 291 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 MAGOHBQ96A72 148 aaKnown RBP12.47□□□□□ -0.41
DDX41-210ENST00000509576 FBXL8Q96CD0 374 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 PDLIM2Q96JY6 352 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 GPAMQ9HCL2 828 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 ZFP69BQ9UJL9 534 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 RNF6Q9Y252 685 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 LIPGQ9Y5X9 500 aa12.47□□□□□ -0.41
DDX41-210ENST00000509576 NIPBLQ6KC79 2804 aaeCLIP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms