RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TSPAN10Q9H1Z9 355 aaPredicted RBP14.44□□□□□ -0.1
TPM3-219ENST00000509409 CLK4Q9HAZ1 481 aaKnown RBP14.44□□□□□ -0.1
TPM3-219ENST00000509409 LRFN1Q9P244 771 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 NPIPA1Q9UND3 350 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 PSAT1Q9Y617 370 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 CREBBPQ92793 2442 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 CROCCQ5TZA2 2017 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 EFCAB8A8MWE9 144 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 SLC19A2O60779 497 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 WDR47O94967 919 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 ZNF37AP17032 561 aaPredicted RBP14.43□□□□□ -0.1
TPM3-219ENST00000509409 MAOAP21397 527 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 HNMTP50135 292 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 TAS2R39P59534 338 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 BTN3A2P78410 334 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 FRG1Q14331 258 aaKnown RBP14.43□□□□□ -0.1
TPM3-219ENST00000509409 PPP1R3AQ16821 1122 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 CRYBG3Q68DQ2 2970 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 QSOX2Q6ZRP7 698 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 CAPN12Q6ZSI9 719 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 ZC3HC1Q86WB0 502 aaKnown RBP14.43□□□□□ -0.1
TPM3-219ENST00000509409 CREG2Q8IUH2 290 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 ELP5Q8TE02 316 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 ANKRD7Q92527 254 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 SCMH1Q96GD3 660 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 GPR137Q96N19 417 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 DEFB126Q9BYW3 111 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 SLC6A16Q9GZN6 736 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 KCNF1Q9H3M0 494 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 GRPEL1Q9HAV7 217 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 GPAMQ9HCL2 828 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 PRM3Q9NNZ6 103 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 PRDM9Q9NQV7 894 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 NSMCE4AQ9NXX6 385 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 SNX24Q9Y343 169 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 OARD1Q9Y530 152 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 SAR1BQ9Y6B6 198 aa14.43□□□□□ -0.1
TPM3-219ENST00000509409 ITPR2Q14571 2701 aa14.42□□□□□ -0.1
TPM3-219ENST00000509409 CTAGE15A4D2H0 777 aa14.42□□□□□ -0.1
TPM3-219ENST00000509409 NCF1BA6NI72 391 aaPredicted RBP14.42□□□□□ -0.1
TPM3-219ENST00000509409 NCF1CA8MVU1 366 aaPredicted RBP14.42□□□□□ -0.1
TPM3-219ENST00000509409 SEC31AO94979 1220 aaKnown RBP14.42□□□□□ -0.1
TPM3-219ENST00000509409 SERPINA6P08185 405 aa14.42□□□□□ -0.1
TPM3-219ENST00000509409 SMIM10L1P0DMW3 83 aa14.42□□□□□ -0.1
TPM3-219ENST00000509409 C1GALT1C1LP0DN25 315 aa14.42□□□□□ -0.1
TPM3-219ENST00000509409 NCF1P14598 390 aaPredicted RBP14.42□□□□□ -0.1
TPM3-219ENST00000509409 GNAZP19086 355 aa14.42□□□□□ -0.1
TPM3-219ENST00000509409 TPP2P29144 1249 aaPredicted RBP14.42□□□□□ -0.1
TPM3-219ENST00000509409 GDF5P43026 501 aa14.42□□□□□ -0.1
TPM3-219ENST00000509409 STXBP1P61764 594 aaKnown RBP14.42□□□□□ -0.1
TPM3-219ENST00000509409 CDKL1Q00532 357 aa14.42□□□□□ -0.1
TPM3-219ENST00000509409 TSNQ15631 228 aaKnown RBP14.42□□□□□ -0.1
TPM3-219ENST00000509409 C3AR1Q16581 482 aa14.42□□□□□ -0.1
TPM3-219ENST00000509409 C18orf21Q32NC0 220 aaPredicted RBP14.42□□□□□ -0.1
TPM3-219ENST00000509409 RPTNQ6XPR3 784 aa14.42□□□□□ -0.1
TPM3-219ENST00000509409 CTAGE6Q86UF2 777 aa14.42□□□□□ -0.1
TPM3-219ENST00000509409 TICAM1Q8IUC6 712 aa14.42□□□□□ -0.1
TPM3-219ENST00000509409 ZBED8Q8IZ13 594 aa14.42□□□□□ -0.1
TPM3-219ENST00000509409 LGI4Q8N135 537 aa14.42□□□□□ -0.1
TPM3-219ENST00000509409 ZNF808Q8N4W9 903 aaPredicted RBP14.42□□□□□ -0.1
TPM3-219ENST00000509409 CREB3L4Q8TEY5 395 aa14.42□□□□□ -0.1
TPM3-219ENST00000509409 ANKRD49Q8WVL7 239 aa14.42□□□□□ -0.1
TPM3-219ENST00000509409 TMEM125Q96AQ2 219 aa14.42□□□□□ -0.1
TPM3-219ENST00000509409 SMIM10Q96HG1 83 aa14.42□□□□□ -0.1
TPM3-219ENST00000509409 NAPGQ99747 312 aaPredicted RBP14.42□□□□□ -0.1
TPM3-219ENST00000509409 UNKQ9C0B0 810 aaKnown RBP14.42□□□□□ -0.1
TPM3-219ENST00000509409 NECTIN3Q9NQS3 549 aa14.42□□□□□ -0.1
TPM3-219ENST00000509409 MOCS1Q9NZB8 636 aa14.42□□□□□ -0.1
TPM3-219ENST00000509409 KLF2Q9Y5W3 355 aaPredicted RBP14.42□□□□□ -0.1
TPM3-219ENST00000509409 MYO7BQ6PIF6 2116 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 SAGE2PA6NJ88 616 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 USP27XA6NNY8 438 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 CCDC188H7C350 402 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 FCHO1O14526 889 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 SLC25A12O75746 678 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 NEURL1O76050 574 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 HTR1EP28566 365 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 GRNP28799 593 aaKnown RBP14.41□□□□□ -0.1
TPM3-219ENST00000509409 TNFRSF8P28908 595 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 CYB561P49447 251 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 SMSP52788 366 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 MLF1P58340 268 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 HYAL2Q12891 473 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 SLBPQ14493 270 aaKnown RBP eCLIP14.41□□□□□ -0.1
TPM3-219ENST00000509409 FASTKD3Q14CZ7 662 aaKnown RBP14.41□□□□□ -0.1
TPM3-219ENST00000509409 ZNF468Q5VIY5 522 aaPredicted RBP14.41□□□□□ -0.1
TPM3-219ENST00000509409 ADAMTSL2Q86TH1 951 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 SPPL2CQ8IUH8 684 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 CEP97Q8IW35 865 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 MCEMP1Q8IX19 187 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 KRT78Q8N1N4 520 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 CA13Q8N1Q1 262 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 TTLQ8NG68 377 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 THAP3Q8WTV1 239 aaPredicted RBP14.41□□□□□ -0.1
TPM3-219ENST00000509409 PYROXD1Q8WU10 500 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 KRT12Q99456 494 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 PNO1Q9NRX1 252 aaKnown RBP14.41□□□□□ -0.1
TPM3-219ENST00000509409 TINAGQ9UJW2 476 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 FBXW2Q9UKT8 454 aa14.41□□□□□ -0.1
TPM3-219ENST00000509409 SCN2AQ99250 2005 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms