RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 ALBP02768 609 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 C8BP07358 591 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 PKMP14618 531 aaKnown RBP7.67□□□□□ -1.18
SCN1A-207ENST00000507401 CHRM3P20309 590 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 IVDP26440 423 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 ADH6P28332 368 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 PEBP1P30086 187 aaKnown RBP7.67□□□□□ -1.18
SCN1A-207ENST00000507401 HSD17B2P37059 387 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 MAGEA3P43357 314 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 CDK9P50750 372 aaKnown RBP7.67□□□□□ -1.18
SCN1A-207ENST00000507401 ITGA8P53708 1063 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 RRADP55042 308 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 RPS18P62269 152 aaKnown RBP7.67□□□□□ -1.18
SCN1A-207ENST00000507401 IL10RAQ13651 578 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 ARHGAP19Q14CB8 494 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 BCL2A1Q16548 175 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 CYP2A13Q16696 494 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 FAM214AQ32MH5 1076 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 TCTE1Q5JU00 501 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 CTSL3PQ5NE16 218 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 LGSNQ5TDP6 509 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 C1orf146Q5VVC0 180 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 CASC4Q6P4E1 433 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 FAM198BQ6UWH4 519 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 UGT2A3Q6UWM9 527 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 CES3Q6UWW8 571 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 LINC00299Q6ZSB3 139 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 ASB18Q6ZVZ8 466 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 NEK10Q6ZWH5 1172 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 RAB43Q86YS6 212 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 ULK2Q8IYT8 1036 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 NAT8LQ8N9F0 302 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 TEX19Q8NA77 164 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 ADCY4Q8NFM4 1077 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 CALML6Q8TD86 181 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 PYROXD1Q8WU10 500 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 STON2Q8WXE9 905 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 DLG3Q92796 817 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 PTERQ96BW5 349 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 CMTM5Q96DZ9 223 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 COX4I2Q96KJ9 171 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 SIGLEC10Q96LC7 697 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 ZNF285Q96NJ3 590 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 NDC1Q9BTX1 674 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 ING2Q9H160 280 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 PARVBQ9HBI1 364 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 ACSS2Q9NR19 701 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 MKS1Q9NXB0 559 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.67□□□□□ -1.18
SCN1A-207ENST00000507401 GPN3Q9UHW5 284 aaPredicted RBP7.67□□□□□ -1.18
SCN1A-207ENST00000507401 PTBP2Q9UKA9 531 aaKnown RBP7.67□□□□□ -1.18
SCN1A-207ENST00000507401 PLAGL1Q9UM63 463 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 G3BP2Q9UN86 482 aaKnown RBP7.67□□□□□ -1.18
SCN1A-207ENST00000507401 B3GNT3Q9Y2A9 372 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 CRYL1Q9Y2S2 319 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 COMMD10Q9Y6G5 202 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 PCM1Q15154 2024 aa7.67□□□□□ -1.18
SCN1A-207ENST00000507401 FLNCQ14315 2725 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 ZCWPW2A0A1B0GU75 182 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 FITM1A5D6W6 292 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 HTR3EA5X5Y0 456 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 CAPN14A8MX76 684 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 PSIP1O75475 530 aaKnown RBP7.66□□□□□ -1.18
SCN1A-207ENST00000507401 SERPINA6P08185 405 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 DHRS4L1P0CG22 281 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 ZCCHC18P0CG32 403 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 CBSLP0DN79 551 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 MAGP20916 626 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 CBSP35520 551 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 GRIA3P42263 894 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 VPS41P49754 854 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 CLCN7P51798 805 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 SOX8P57073 446 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 RELAQ04206 551 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 BTKQ06187 659 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 GRM7Q14831 915 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 PTCHD3Q3KNS1 767 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 TTLL9Q3SXZ7 439 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 NKAIN1Q4KMZ8 207 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 MLIPQ5VWP3 458 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 ANKRD22Q5VYY1 191 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 FCRL6Q6DN72 434 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 FIGLAQ6QHK4 219 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 PPIL6Q8IXY8 311 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 ZBTB2Q8N680 514 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 ZNF655Q8N720 491 aaPredicted RBP7.66□□□□□ -1.18
SCN1A-207ENST00000507401 FBXO15Q8NCQ5 510 aaPredicted RBP7.66□□□□□ -1.18
SCN1A-207ENST00000507401 OR2A1Q8NGT9 310 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 OR9A1PQ8NGU1 263 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 OR2Y1Q8NGV0 311 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 GABPB2Q8TAK5 448 aaPredicted RBP7.66□□□□□ -1.18
SCN1A-207ENST00000507401 ZNF420Q8TAQ5 688 aaPredicted RBP7.66□□□□□ -1.18
SCN1A-207ENST00000507401 SKA2Q8WVK7 121 aaPredicted RBP7.66□□□□□ -1.18
SCN1A-207ENST00000507401 KCNJ9Q92806 393 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 BORCS5Q969J3 196 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 FER1L6-AS2Q96M78 137 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 SERPINI1Q99574 410 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 NAT9Q9BTE0 207 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 SLC25A23Q9BV35 468 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 NUF2Q9BZD4 464 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms