RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 GTF2H2CQ6P1K8 395 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 MED27Q6P2C8 311 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 MED25Q71SY5 747 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 COX15Q7KZN9 410 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 SLC22A9Q8IVM8 553 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 APLFQ8IW19 511 aaPredicted RBP6.89□□□□□ -1.31
GYPB-206ENST00000506516 VWA5B2Q8N398 1253 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 ARHGEF39Q8N4T4 335 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 ANKRD53Q8N9V6 530 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 OR9A4Q8NGU2 314 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 PPP4R1Q8TF05 950 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.89□□□□□ -1.31
GYPB-206ENST00000506516 CCT6BQ92526 530 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 TTC9Q92623 222 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 REPS1Q96D71 796 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 WDR34Q96EX3 536 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 FAR2Q96K12 515 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 MAGEB10Q96LZ2 347 aaPredicted RBP6.89□□□□□ -1.31
GYPB-206ENST00000506516 TGIF2Q9GZN2 237 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 RHBGQ9H310 441 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 IPPKQ9H8X2 491 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 ACTR8Q9H981 624 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 SYNPO2LQ9H987 977 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 CLK4Q9HAZ1 481 aaKnown RBP6.89□□□□□ -1.31
GYPB-206ENST00000506516 ACSS2Q9NR19 701 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 SEMA3GQ9NS98 782 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 C14orf105Q9NVL8 296 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 TMEM216Q9P0N5 145 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 COPG2Q9UBF2 871 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 TRPC4Q9UBN4 977 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 ADGRE2Q9UHX3 823 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 GRID1Q9ULK0 1009 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 ZNF490Q9ULM2 529 aaPredicted RBP6.89□□□□□ -1.31
GYPB-206ENST00000506516 G3BP2Q9UN86 482 aaKnown RBP6.89□□□□□ -1.31
GYPB-206ENST00000506516 NAALAD2Q9Y3Q0 740 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 KCNMB2Q9Y691 235 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 IGF2RP11717 2491 aa6.89□□□□□ -1.31
GYPB-206ENST00000506516 NBEAQ8NFP9 2946 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 ADAMTS20P59510 1910 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 IGLV3-12A0A075B6K2 115 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 LRIT2A6NDA9 550 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 MKRN2OSH3BPM6 223 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 SGK494L7N484 410 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 E2F3O00716 465 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 COPEO14579 308 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 PCDH17O14917 1159 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 KLHL41O60662 606 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 GALR3O60755 368 aaPredicted RBP6.88□□□□□ -1.31
GYPB-206ENST00000506516 KLHL18O94889 574 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 SIX3O95343 332 aaPredicted RBP6.88□□□□□ -1.31
GYPB-206ENST00000506516 CLDN9O95484 217 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 PCNAP12004 261 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 IL1RNP18510 177 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 KRT4P19013 534 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 EPORP19235 508 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 IMPDH1P20839 514 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 MMP11P24347 488 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 ATP5F1P24539 256 aaPredicted RBP6.88□□□□□ -1.31
GYPB-206ENST00000506516 EEF1DP29692 281 aaKnown RBP6.88□□□□□ -1.31
GYPB-206ENST00000506516 CRHR1P34998 444 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 CCNG1P51959 295 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 EMP2P54851 167 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 POLE2P56282 527 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 RAB8AP61006 207 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 PHEXP78562 749 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 KLC1Q07866 573 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 IL10RAQ13651 578 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 E2F2Q14209 437 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 LINC00303Q3SY05 128 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 CCDC153Q494R4 210 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 DEFB134Q4QY38 66 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 VWA2Q5GFL6 755 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 TOR1AIP1Q5JTV8 583 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 ATP1A1-AS1Q5TC04 95 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 MFSD4BQ5TF39 518 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 TRIM40Q6P9F5 258 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 CHSY3Q70JA7 882 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 CROCCP2Q86T23 111 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 MYLK4Q86YV6 388 aaPredicted RBP6.88□□□□□ -1.31
GYPB-206ENST00000506516 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.88□□□□□ -1.31
GYPB-206ENST00000506516 LAS2Q8IYD9 372 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 TMEM151AQ8N4L1 468 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 AFAP1L2Q8N4X5 818 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 MREGQ8N565 214 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 TMEM102Q8N9M5 508 aaPredicted RBP6.88□□□□□ -1.31
GYPB-206ENST00000506516 SRFBP1Q8NEF9 429 aaKnown RBP6.88□□□□□ -1.31
GYPB-206ENST00000506516 OR51Q1Q8NH59 317 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 OR2W6PQ8NHA6 318 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 ZCCHC10Q8TBK6 192 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 ADAMTS17Q8TE56 1095 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 EPS8L3Q8TE67 593 aaKnown RBP6.88□□□□□ -1.31
GYPB-206ENST00000506516 UTP15Q8TED0 518 aaKnown RBP6.88□□□□□ -1.31
GYPB-206ENST00000506516 CREB3L4Q8TEY5 395 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 MZB1Q8WU39 189 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 METTL21AQ8WXB1 218 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 CCDC126Q96EE4 140 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 MOCOSQ96EN8 888 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 CENPKQ9BS16 269 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 CRB3Q9BUF7 120 aa6.88□□□□□ -1.31
GYPB-206ENST00000506516 REXO4Q9GZR2 422 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms