RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 PKD1L2Q7Z442 2459 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 A0A0A6YYD5 115 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 A0A1W2PQ72 361 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 VSTM2BA6NLU5 285 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 TGFBR3LH3BV60 316 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 MEN1O00255 615 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 RTCAO00442 366 aaKnown RBP4.68□□□□□ -1.66
LMNB1-208ENST00000504788 CYR61O00622 381 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 SDHDO14521 159 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 DSCR3O14972 297 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 PIP5K1BO14986 540 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 ANKRD28O15084 1053 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 GPR37O15354 613 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 NDUFS4O43181 175 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 TMPRSS11DO60235 418 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 H2AFYO75367 372 aaKnown RBP4.68□□□□□ -1.66
LMNB1-208ENST00000504788 EEDO75530 441 aaKnown RBP4.68□□□□□ -1.66
LMNB1-208ENST00000504788 SCRG1O75711 98 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 STK17BO94768 372 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 SEMA3DO95025 777 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 SNUPNO95149 360 aaKnown RBP4.68□□□□□ -1.66
LMNB1-208ENST00000504788 TNFSF15O95150 251 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 NSA2O95478 260 aaKnown RBP4.68□□□□□ -1.66
LMNB1-208ENST00000504788 RECKO95980 971 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 TGFB1P01137 390 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 NTRK1P04629 796 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 HSD3B1P14060 373 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 CD1EP15812 388 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 ALOX12P18054 663 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 CXCR2P25025 360 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 HSD3B2P26439 372 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 TSFMP43897 325 aaKnown RBP4.68□□□□□ -1.66
LMNB1-208ENST00000504788 ZFP36L2P47974 494 aaKnown RBP4.68□□□□□ -1.66
LMNB1-208ENST00000504788 RPL14P50914 215 aaKnown RBP4.68□□□□□ -1.66
LMNB1-208ENST00000504788 HNRNPFP52597 415 aaKnown RBP4.68□□□□□ -1.66
LMNB1-208ENST00000504788 CYP4F2P78329 520 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 HMGCS1Q01581 520 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 BTKQ06187 659 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 FOXM1Q08050 763 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 CSTF3Q12996 717 aaKnown RBP4.68□□□□□ -1.66
LMNB1-208ENST00000504788 STX3Q13277 289 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 RUNX2Q13950 521 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 MAP7Q14244 749 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 GRM7Q14831 915 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 TGIF1Q15583 401 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 PRSS53Q2L4Q9 553 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 TBC1D25Q3MII6 688 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 RFTN2Q52LD8 501 aaPredicted RBP4.68□□□□□ -1.66
LMNB1-208ENST00000504788 PAGE2BQ5JRK9 111 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 SH2D4BQ5SQS7 431 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 HHATQ5VTY9 493 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 YOD1Q5VVQ6 348 aaPredicted RBP4.68□□□□□ -1.66
LMNB1-208ENST00000504788 FAM199XQ6PEV8 388 aaPredicted RBP4.68□□□□□ -1.66
LMNB1-208ENST00000504788 SCIMPQ6UWF3 145 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 CEACAM20Q6UY09 585 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 ERMP1Q7Z2K6 904 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 WDR75Q8IWA0 830 aaKnown RBP4.68□□□□□ -1.66
LMNB1-208ENST00000504788 METTL4Q8N3J2 472 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 CAMKVQ8NCB2 501 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 TMEM52Q8NDY8 209 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 TTLQ8NG68 377 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 OR5T3Q8NGG3 340 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 PIWIL2Q8TC59 973 aaKnown RBP4.68□□□□□ -1.66
LMNB1-208ENST00000504788 METTL6Q8TCB7 284 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 TWIST2Q8WVJ9 160 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 NKD1Q969G9 470 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 GAL3ST3Q96A11 431 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 RNF31Q96EP0 1072 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 APIPQ96GX9 242 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 ZPBPQ9BS86 351 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 MRPL1Q9BYD6 325 aaKnown RBP4.68□□□□□ -1.66
LMNB1-208ENST00000504788 ASPSCR1Q9BZE9 553 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 STRADBQ9C0K7 418 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 REXO4Q9GZR2 422 aaKnown RBP4.68□□□□□ -1.66
LMNB1-208ENST00000504788 MEAF6Q9HAF1 191 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 LANCL2Q9NS86 450 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 CUTCQ9NTM9 273 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 SLC39A1Q9NY26 324 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 NKIRAS1Q9NYS0 192 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 GIMAP2Q9UG22 337 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 RARRES3Q9UL19 164 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 DLGAP4Q9Y2H0 992 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 STK38LQ9Y2H1 464 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 ASB4Q9Y574 426 aa4.68□□□□□ -1.66
LMNB1-208ENST00000504788 TPRP12270 2363 aaKnown RBP4.68□□□□□ -1.66
LMNB1-208ENST00000504788 URB1O60287 2271 aaKnown RBP4.68□□□□□ -1.66
LMNB1-208ENST00000504788 KMT2BQ9UMN6 2715 aaPredicted RBP4.68□□□□□ -1.66
LMNB1-208ENST00000504788 NUP214P35658 2090 aaPredicted RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 A0A0A6YYC8 382 aaPredicted RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 A0A1B0GX78 115 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 PABPN1LA6NDY0 278 aaKnown RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 H0YIG0 161 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 I3L1I5 382 aaPredicted RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 SHOX2O60902 331 aaPredicted RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ULK1O75385 1050 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 KIAA0754O94854 1291 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ALDOCP09972 364 aaKnown RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 SLC35G6P0C7Q6 338 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ZNF888P0CJ79 500 aaPredicted RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 IL1RNP18510 177 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms