RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 GKN2Q86XP6 184 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 OR10G2Q8NGC3 310 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 Q96MT0 163 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 TPK1Q9H3S4 243 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 MVB12BQ9H7P6 319 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 EVA1BQ9NVM1 165 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 P2RX2Q9UBL9 471 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 CASP8AP2Q9UKL3 1982 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 FAM170BA6NMN3 283 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 EIF3FO00303 357 aaPredicted RBP13.54□□□□□ -0.24
TCOF1-207ENST00000504761 PEX11BO96011 259 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 NR2F6P10588 404 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 INAQ16352 499 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 LIN52Q52LA3 116 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 KCNC2Q96PR1 638 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 IL4I1Q96RQ9 567 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 SLAMF8Q9P0V8 285 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 SMIM31A0A1B0GVY4 71 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 EEDO75530 441 aaKnown RBP13.54□□□□□ -0.24
TCOF1-207ENST00000504761 REM1O75628 298 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 ALPPP05187 535 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 TFPIP10646 304 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 FMO3P31513 532 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 MCCD1P59942 119 aaPredicted RBP13.54□□□□□ -0.24
TCOF1-207ENST00000504761 MC1RQ01726 317 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 ZNF423Q2M1K9 1284 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 CYBRD1Q53TN4 286 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 PIGGQ5H8A4 983 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 SBSNQ6UWP8 590 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 SATL1Q86VE3 508 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 RASSF5Q8WWW0 418 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 TM7SF3Q9NS93 570 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 SPATA6Q9NWH7 488 aaPredicted RBP13.54□□□□□ -0.24
TCOF1-207ENST00000504761 TVP23BQ9NYZ1 205 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 GPRC5BQ9NZH0 403 aa13.54□□□□□ -0.24
TCOF1-207ENST00000504761 GPN3Q9UHW5 284 aaPredicted RBP13.54□□□□□ -0.24
TCOF1-207ENST00000504761 SEC16AO15027 2179 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 TMEM202A6NGA9 273 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 MAGP20916 626 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 GPX3P22352 226 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 NNATQ16517 81 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 WSCD2Q2TBF2 565 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 CCSMST1Q4G0I0 132 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 CLEC12AQ5QGZ9 265 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 ASTLQ6HA08 431 aaPredicted RBP13.53□□□□□ -0.24
TCOF1-207ENST00000504761 SVOPLQ8N434 492 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 MINDY1Q8N5J2 469 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 PDPRQ8NCN5 879 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 SETD7Q8WTS6 366 aaKnown RBP13.53□□□□□ -0.24
TCOF1-207ENST00000504761 FBXL20Q96IG2 436 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 POLR2J3Q9H1A7 115 aaKnown RBP13.53□□□□□ -0.24
TCOF1-207ENST00000504761 NEUROD4Q9HD90 331 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 DDX28Q9NUL7 540 aaKnown RBP13.53□□□□□ -0.24
TCOF1-207ENST00000504761 PTBP2Q9UKA9 531 aaKnown RBP13.53□□□□□ -0.24
TCOF1-207ENST00000504761 ZNF451Q9Y4E5 1061 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 PCDHGA7Q9Y5G6 932 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 PENKP01210 267 aaPredicted RBP13.53□□□□□ -0.24
TCOF1-207ENST00000504761 SIM1P81133 766 aaPredicted RBP13.53□□□□□ -0.24
TCOF1-207ENST00000504761 ATP1A4Q13733 1029 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 ELOCQ15369 112 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 DUSP6Q16828 381 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 GALNT7Q86SF2 657 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 C12orf40Q86WS4 652 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 VN1R2Q8NFZ6 395 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 TP53INP1Q96A56 240 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 MMABQ96EY8 250 aaPredicted RBP13.53□□□□□ -0.24
TCOF1-207ENST00000504761 MYADMQ96S97 322 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 NUAK2Q9H093 628 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 CMTM6Q9NX76 183 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 VAPAQ9P0L0 249 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 RSL24D1Q9UHA3 163 aaKnown RBP13.53□□□□□ -0.24
TCOF1-207ENST00000504761 C2orf74A8MZ97 194 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 NPC1O15118 1278 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 KIF1CO43896 1103 aaKnown RBP13.53□□□□□ -0.24
TCOF1-207ENST00000504761 DLGAP3O95886 979 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 ETFAP13804 333 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 PRLHRP49683 370 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 XKP51811 444 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 IST1P53990 364 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 LPAL2Q16609 132 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 UNC5DQ6UXZ4 953 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 LUZP2Q86TE4 346 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 ASPGQ86U10 573 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 GHDCQ8N2G8 530 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 POMGNT2Q8NAT1 580 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 WDR36Q8NI36 951 aaKnown RBP13.53□□□□□ -0.24
TCOF1-207ENST00000504761 RNFT2Q96EX2 444 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 CALML5Q9NZT1 146 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 DKK3Q9UBP4 350 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 A0A096LPI6 279 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 DUXAA6NLW8 204 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 C9P02748 559 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 OR12D1P0DN82 309 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 SDC1P18827 310 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 HHEXQ03014 270 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 TRAF3Q13114 568 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 VMACQ2NL98 169 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 ZNF311Q5JNZ3 666 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 KLHDC8AQ8IYD2 350 aa13.53□□□□□ -0.24
TCOF1-207ENST00000504761 FAM98AQ8NCA5 519 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms