RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 ZFYVE21Q9BQ24 234 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 GPATCH1Q9BRR8 931 aaKnown RBP9.9□□□□□ -0.82
TPM3-217ENST00000504663 BTBD10Q9BSF8 475 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 SLC25A23Q9BV35 468 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 DUSP23Q9BVJ7 150 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 MYNNQ9NPC7 610 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 PADI4Q9UM07 663 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 RRP15Q9Y3B9 282 aaKnown RBP9.9□□□□□ -0.82
TPM3-217ENST00000504663 PCDHGA7Q9Y5G6 932 aa9.9□□□□□ -0.82
TPM3-217ENST00000504663 FER1L5A0AVI2 2057 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 RALGAPA1Q6GYQ0 2036 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 A0A088AWK7 358 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 A0A1W2PP18 115 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 EME2A4GXA9 379 aaPredicted RBP9.89□□□□□ -0.83
TPM3-217ENST00000504663 TLCD2A6NGC4 264 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 ANKDD1BA6NHY2 528 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 SLC9B1P1A6NJY1 282 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 RHPN2P1A8MT19 583 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 BBIP1A8MTZ0 92 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 H0YGG7 62 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 SCAMP2O15127 329 aaKnown RBP9.89□□□□□ -0.83
TPM3-217ENST00000504663 CAPN5O15484 640 aaPredicted RBP9.89□□□□□ -0.83
TPM3-217ENST00000504663 PRMT3O60678 531 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 SORBS2O94875 1100 aaKnown RBP9.89□□□□□ -0.83
TPM3-217ENST00000504663 ANXA4P09525 319 aaPredicted RBP9.89□□□□□ -0.83
TPM3-217ENST00000504663 ZNF883P0CG24 379 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 PIM1P11309 404 aaPredicted RBP9.89□□□□□ -0.83
TPM3-217ENST00000504663 NQO1P15559 274 aaKnown RBP9.89□□□□□ -0.83
TPM3-217ENST00000504663 MAPK1P28482 360 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 NUDT2P50583 147 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 ARFIP1P53367 373 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 ARF3P61204 181 aaPredicted RBP9.89□□□□□ -0.83
TPM3-217ENST00000504663 PHEXP78562 749 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 HKDC1Q2TB90 917 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 PRTGQ2VWP7 1150 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 DEFB110Q30KQ9 67 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 TOR1AIP1Q5JTV8 583 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 CACHD1Q5VU97 1274 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 LAIR1Q6GTX8 287 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 IRGCQ6NXR0 463 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 DLEU7Q6UYE1 221 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 FAM92BQ6ZTR7 304 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 ASPGQ86U10 573 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 DSELQ8IZU8 1212 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 DPP10Q8N608 796 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 EID2Q8N6I1 236 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 KCT2Q8NC54 265 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 TRPV3Q8NET8 790 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 OR2L5Q8NG80 312 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 UTP15Q8TED0 518 aaKnown RBP9.89□□□□□ -0.83
TPM3-217ENST00000504663 C16orf78Q8WTQ4 265 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 TM4SF18Q96CE8 201 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 KLHL29Q96CT2 875 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 CLPTM1LQ96KA5 538 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 CD180Q99467 661 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 NUDT22Q9BRQ3 303 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 TRIM4Q9C037 500 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 DDX31Q9H8H2 851 aaKnown RBP9.89□□□□□ -0.83
TPM3-217ENST00000504663 C1GALT1Q9NS00 363 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 SLC6A13Q9NSD5 602 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 RXFP3Q9NSD7 469 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 DNAAF2Q9NVR5 837 aaKnown RBP9.89□□□□□ -0.83
TPM3-217ENST00000504663 TEX10Q9NXF1 929 aaPredicted RBP9.89□□□□□ -0.83
TPM3-217ENST00000504663 SLAMF8Q9P0V8 285 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 ATP6V1HQ9UI12 483 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 ADAM29Q9UKF5 820 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 MAN2B2Q9Y2E5 1009 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 CROCCQ5TZA2 2017 aa9.89□□□□□ -0.83
TPM3-217ENST00000504663 A0A0G2JN53 185 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 CDX4O14627 284 aaPredicted RBP9.88□□□□□ -0.83
TPM3-217ENST00000504663 MRASO14807 208 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 AIM2O14862 343 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 TBX19O60806 448 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 DNAJB6O75190 326 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 LRATO95237 230 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 C1QCP02747 245 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 KLK1P06870 262 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 SYPP08247 313 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 FURINP09958 794 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 CKMT1AP12532 417 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 GRK3P35626 688 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 HNRNPFP52597 415 aaKnown RBP9.88□□□□□ -0.83
TPM3-217ENST00000504663 GPLD1P80108 840 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 MC1RQ01726 317 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 ZNF763Q0D2J5 394 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 PWP1Q13610 501 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 NR0B2Q15466 257 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 MUM1Q2TAK8 710 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 FAM174BQ3ZCQ3 159 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 TMEM35AQ53FP2 167 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 OR4C11Q6IEV9 310 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 ANKRD26P1Q6NSI1 321 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 TMEM214Q6NUQ4 689 aaKnown RBP9.88□□□□□ -0.83
TPM3-217ENST00000504663 KLHL35Q6PF15 583 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 SLC2A7Q6PXP3 512 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 ZNF574Q6ZN55 896 aaPredicted RBP9.88□□□□□ -0.83
TPM3-217ENST00000504663 PRSS41Q7RTY9 318 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 GPR155Q7Z3F1 870 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 PRSS42Q7Z5A4 293 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 NUDT13Q86X67 352 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms