RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 FAM69BQ5VUD6 431 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 GARNL3Q5VVW2 1013 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 KHDRBS2Q5VWX1 349 aaKnown RBP12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 CACNA2D3Q8IZS8 1091 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 NLGN4XQ8N0W4 816 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 NLGN4YQ8NFZ3 816 aaPredicted RBP12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 OR5T3Q8NGG3 340 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 NKD1Q969G9 470 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 MMABQ96EY8 250 aaPredicted RBP12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 CMTM7Q96FZ5 175 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 SMIM10Q96HG1 83 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 MAGEB10Q96LZ2 347 aaPredicted RBP12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 C17orf62Q9BQA9 187 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 YIPF2Q9BWQ6 316 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 B3GNT4Q9C0J1 378 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 REXO4Q9GZR2 422 aaKnown RBP12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 TUBB1Q9H4B7 451 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 ANKHQ9HCJ1 492 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 HCN3Q9P1Z3 774 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 SLC12A4Q9UP95 1085 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 NAALAD2Q9Y3Q0 740 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 TSC22D4Q9Y3Q8 395 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 WDFY3Q8IZQ1 3526 aa12.59□□□□□ -0.39
PDLIM7-212ENST00000504380 LOC101059948A0A1B0GTJ6 334 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 FOXE1O00358 373 aaPredicted RBP12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 ULK1O75385 1050 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 SKAP2O75563 359 aaPredicted RBP12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 CAPNS1P04632 268 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 KLK3P07288 261 aaPredicted RBP12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 LINC00032P0C843 101 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 UROSP10746 265 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 ALOX12P18054 663 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 PTX3P26022 381 aaPredicted RBP12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 GSTM2P28161 218 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 SERPINB1P30740 379 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 SERPINB5P36952 375 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 EMP3P54852 163 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 PHEXP78562 749 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 DCDP81605 110 aaKnown RBP12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 BTKQ06187 659 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 ADPRMQ3LIE5 342 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 UGT3A2Q3SY77 523 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 NKAIN1Q4KMZ8 207 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 MANEAQ5SRI9 462 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 YOD1Q5VVQ6 348 aaPredicted RBP12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 MLIPQ5VWP3 458 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 KANK2Q63ZY3 851 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 ATG16L1Q676U5 607 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 ABHD17CQ6PCB6 329 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 COX15Q7KZN9 410 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 ABHD13Q7L211 337 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 VASH2Q86V25 355 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 DTX1Q86Y01 620 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 TRIM42Q8IWZ5 723 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 CLYBLQ8N0X4 340 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 AFAP1L2Q8N4X5 818 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 OR2L5Q8NG80 312 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 CT55Q8WUE5 264 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 CKAP2Q8WWK9 683 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 FGF11Q92914 225 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 GAL3ST3Q96A11 431 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 PPP1R36Q96LQ0 422 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 QRFPRQ96P65 431 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 ACPTQ9BZG2 426 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 ZNF304Q9HCX3 659 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 LHX9Q9NQ69 397 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 ADGRE2Q9UHX3 823 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 PADI1Q9ULC6 663 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 DNAJC15Q9Y5T4 150 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 SLC22A7Q9Y694 548 aa12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 DSPP15924 2871 aaKnown RBP12.58□□□□□ -0.4
PDLIM7-212ENST00000504380 DMXL2Q8TDJ6 3036 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 URADA6NGE7 173 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 TAF4O00268 1085 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 PLPP1O14494 284 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 PIP5K1BO14986 540 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 GALR3O60755 368 aaPredicted RBP12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 CNOT3O75175 753 aaKnown RBP12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 SNNO75324 88 aaPredicted RBP12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 EEDO75530 441 aaKnown RBP12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 GBAP04062 536 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 JUNP05412 331 aaKnown RBP12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 FGF4P08620 206 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 CCNYL3P0C7X3 344 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 KITP10721 976 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 TCN2P20062 427 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 FBLP22087 321 aaKnown RBP12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 F8A1P23610 371 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 CERS1P27544 350 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 CD82P27701 267 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 AVPR1BP47901 424 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 RAP1GDS1P52306 607 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 PCBP4P57723 403 aaKnown RBP12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 ABHD18Q0P651 414 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 GALNT1Q10472 559 aaPredicted RBP12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 CLN3Q13286 438 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 RUNX2Q13950 521 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 FAM53BQ14153 422 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 ERV3-1Q14264 604 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 ARHGAP40Q5TG30 622 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms