RNA–Protein interactions for RNA: ENST00000504246.5

LINC00461-203, long intergenic non-protein coding RNA 461, humanhuman

TSL 2 BASIC

Gene LINC00461, Length 2,300 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-203ENST00000504246 CCL23P55773 120 aa17.77■□□□□ 0.44
LINC00461-203ENST00000504246 PRKCDQ05655 676 aa17.77■□□□□ 0.44
LINC00461-203ENST00000504246 SLC13A2Q13183 592 aa17.77■□□□□ 0.44
LINC00461-203ENST00000504246 E2F2Q14209 437 aa17.77■□□□□ 0.44
LINC00461-203ENST00000504246 CCSMST1Q4G0I0 132 aa17.77■□□□□ 0.44
LINC00461-203ENST00000504246 ZNF385BQ569K4 471 aa17.77■□□□□ 0.44
LINC00461-203ENST00000504246 TRIM40Q6P9F5 258 aa17.77■□□□□ 0.44
LINC00461-203ENST00000504246 CCDC80Q76M96 950 aa17.77■□□□□ 0.44
LINC00461-203ENST00000504246 C9orf43Q8TAL5 461 aaPredicted RBP17.77■□□□□ 0.44
LINC00461-203ENST00000504246 NIPSNAP1Q9BPW8 284 aa17.77■□□□□ 0.44
LINC00461-203ENST00000504246 TMEM165Q9HC07 324 aa17.77■□□□□ 0.44
LINC00461-203ENST00000504246 SACM1LQ9NTJ5 587 aa17.77■□□□□ 0.44
LINC00461-203ENST00000504246 GPATCH2Q9NW75 528 aa17.77■□□□□ 0.44
LINC00461-203ENST00000504246 NFKBIL1Q9UBC1 381 aaPredicted RBP17.77■□□□□ 0.44
LINC00461-203ENST00000504246 DUSP12Q9UNI6 340 aa17.77■□□□□ 0.44
LINC00461-203ENST00000504246 EXO1Q9UQ84 846 aaKnown RBP17.77■□□□□ 0.44
LINC00461-203ENST00000504246 NUP214P35658 2090 aaPredicted RBP17.77■□□□□ 0.44
LINC00461-203ENST00000504246 LOC100506127A0A0U1RQW1 187 aa17.77■□□□□ 0.43
LINC00461-203ENST00000504246 ETV3P41162 512 aa17.77■□□□□ 0.43
LINC00461-203ENST00000504246 OR1E2P47887 323 aa17.77■□□□□ 0.43
LINC00461-203ENST00000504246 PREPP48147 710 aa17.77■□□□□ 0.43
LINC00461-203ENST00000504246 ZNF284Q2VY69 593 aa17.77■□□□□ 0.43
LINC00461-203ENST00000504246 ARMCX4Q5H9R4 360 aa17.77■□□□□ 0.43
LINC00461-203ENST00000504246 ZNF648Q5T619 568 aaPredicted RBP17.77■□□□□ 0.43
LINC00461-203ENST00000504246 HENMT1Q5T8I9 393 aaKnown RBP17.77■□□□□ 0.43
LINC00461-203ENST00000504246 STEAP3Q658P3 488 aa17.77■□□□□ 0.43
LINC00461-203ENST00000504246 ZNF852Q6ZMS4 543 aa17.77■□□□□ 0.43
LINC00461-203ENST00000504246 DEFB128Q7Z7B8 93 aa17.77■□□□□ 0.43
LINC00461-203ENST00000504246 TMPRSS11BQ86T26 416 aa17.77■□□□□ 0.43
LINC00461-203ENST00000504246 NLRP8Q86W28 1048 aa17.77■□□□□ 0.43
LINC00461-203ENST00000504246 POC5Q8NA72 575 aa17.77■□□□□ 0.43
LINC00461-203ENST00000504246 OR4K1Q8NGD4 311 aa17.77■□□□□ 0.43
LINC00461-203ENST00000504246 NFKBIDQ8NI38 313 aa17.77■□□□□ 0.43
LINC00461-203ENST00000504246 GEMIN6Q8WXD5 167 aaKnown RBP17.77■□□□□ 0.43
LINC00461-203ENST00000504246 RIOK2Q9BVS4 552 aaKnown RBP17.77■□□□□ 0.43
LINC00461-203ENST00000504246 GPBP1L1Q9HC44 474 aaPredicted RBP17.77■□□□□ 0.43
LINC00461-203ENST00000504246 PCDHGA3Q9Y5H0 932 aa17.77■□□□□ 0.43
LINC00461-203ENST00000504246 FADS2P1A8MWK0 482 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 DSCR3O14972 297 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 TLL1O43897 1013 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 PTTG1O95997 202 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 RGS6P49758 472 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 ST3GAL4Q11206 333 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 SLCO4C1Q6ZQN7 724 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 ZNF367Q7RTV3 350 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 SCAIQ8N9R8 606 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 OR2A12Q8NGT7 310 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 NEIL2Q969S2 332 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 PIP5K1AQ99755 562 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 CDADC1Q9BWV3 514 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 EHD1Q9H4M9 534 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 SLC5A10A0PJK1 596 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 HTR3EA5X5Y0 456 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 C6orf47O95873 294 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 PTHP01270 115 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 ZNF8P17098 575 aaPredicted RBP17.76■□□□□ 0.43
LINC00461-203ENST00000504246 PRLHRP49683 370 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 IRF3Q14653 427 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 ZNF630Q2M218 657 aaPredicted RBP17.76■□□□□ 0.43
LINC00461-203ENST00000504246 TOR1AIP1Q5JTV8 583 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 TMC8Q8IU68 726 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 BTN2A2Q8WVV5 523 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 HTRA1Q92743 480 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 EFHD2Q96C19 240 aaPredicted RBP17.76■□□□□ 0.43
LINC00461-203ENST00000504246 PPCDCQ96CD2 204 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 CCM2Q9BSQ5 444 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 SPG21Q9NZD8 308 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 KLK4Q9Y5K2 254 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 PEX16Q9Y5Y5 336 aa17.76■□□□□ 0.43
LINC00461-203ENST00000504246 TEX28O15482 410 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 PQBP1O60828 265 aaKnown RBP17.75■□□□□ 0.43
LINC00461-203ENST00000504246 MED26O95402 600 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 CTSAP10619 480 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 PABPC1P11940 636 aaKnown RBP17.75■□□□□ 0.43
LINC00461-203ENST00000504246 POLR2EP19388 210 aaKnown RBP17.75■□□□□ 0.43
LINC00461-203ENST00000504246 FUT4P22083 530 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 GRK5P34947 590 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 CTSCP53634 463 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 CDC42P60953 191 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 CDK6Q00534 326 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 KRR1Q13601 381 aaKnown RBP17.75■□□□□ 0.43
LINC00461-203ENST00000504246 CRB2Q5IJ48 1285 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 ASTLQ6HA08 431 aaPredicted RBP17.75■□□□□ 0.43
LINC00461-203ENST00000504246 RASGEF1AQ8N9B8 481 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.75■□□□□ 0.43
LINC00461-203ENST00000504246 FOXJ1Q92949 421 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 TXNDC15Q96J42 360 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 HHIPL1Q96JK4 782 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 MAPKAP1Q9BPZ7 522 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 OR51E2Q9H255 320 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 MS4A12Q9NXJ0 267 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 HCN4Q9Y3Q4 1203 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 EFCAB10A6NFE3 127 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 FOXE1O00358 373 aaPredicted RBP17.75■□□□□ 0.43
LINC00461-203ENST00000504246 NPC1O15118 1278 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 MPZL2O60487 215 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 GPR37L1O60883 481 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 EIF2S1P05198 315 aaKnown RBP17.75■□□□□ 0.43
LINC00461-203ENST00000504246 XCR1P46094 333 aa17.75■□□□□ 0.43
LINC00461-203ENST00000504246 CASP9P55211 416 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms