RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 OR2L5Q8NG80 312 aa17.23■□□□□ 0.35
PDLIM7-209ENST00000503346 ZNF483Q8TF39 744 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-209ENST00000503346 VPS50Q96JG6 964 aa17.23■□□□□ 0.35
PDLIM7-209ENST00000503346 NSUN5Q96P11 429 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-209ENST00000503346 OR1F2PQ96R84 312 aa17.23■□□□□ 0.35
PDLIM7-209ENST00000503346 NTMT1Q9BV86 223 aa17.23■□□□□ 0.35
PDLIM7-209ENST00000503346 ERVK-6Q9BXR3 956 aa17.23■□□□□ 0.35
PDLIM7-209ENST00000503346 MS4A8Q9BY19 250 aa17.23■□□□□ 0.35
PDLIM7-209ENST00000503346 REXO4Q9GZR2 422 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-209ENST00000503346 ADGRE2Q9UHX3 823 aa17.23■□□□□ 0.35
PDLIM7-209ENST00000503346 PLAAQ9Y263 795 aa17.23■□□□□ 0.35
PDLIM7-209ENST00000503346 PCDHGA11Q9Y5H2 935 aa17.23■□□□□ 0.35
PDLIM7-209ENST00000503346 A0A1W2PQ72 361 aa17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 ERI3O43414 337 aaKnown RBP17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 CHST10O43529 356 aa17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 DNAJB6O75190 326 aa17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 JRKO75564 520 aa17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 DNAJB5O75953 348 aa17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 CLDN9O95484 217 aa17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 HEXBP07686 556 aa17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 KRT4P19013 534 aa17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 PIK3CBP42338 1070 aa17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 EFNA3P52797 238 aa17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 PRKAA2P54646 552 aa17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 ABHD17CQ6PCB6 329 aa17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 MYLK4Q86YV6 388 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 SLC22A9Q8IVM8 553 aa17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 OR52B6Q8NGF0 335 aa17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 ABHD17AQ96GS6 310 aa17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 MKS1Q9NXB0 559 aa17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 MKL2Q9ULH7 1088 aa17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 GRID1Q9ULK0 1009 aa17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 RNF11Q9Y3C5 154 aa17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 PCSK5Q92824 1860 aa17.22■□□□□ 0.35
PDLIM7-209ENST00000503346 A0A088AWK7 358 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 MKRN2OSH3BPM6 223 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 COPEO14579 308 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 CEACAM4O75871 244 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 PROCP04070 461 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 PCNAP12004 261 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 ZNF10P21506 573 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 CCNG1P51959 295 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 OLR1P78380 273 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 BTN3A2P78410 334 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 TRAF3Q13114 568 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 CCDC153Q494R4 210 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 TMEM35AQ53FP2 167 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 ZNF678Q5SXM1 525 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 TRIM40Q6P9F5 258 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 TMEM205Q6UW68 189 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 TRABD2AQ86V40 505 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 C4orf33Q8N1A6 199 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 OR11G2Q8NGC1 345 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 HUS1BQ8NHY5 278 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 ATP6V1E2Q96A05 226 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 TBC1D20Q96BZ9 403 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 REPS1Q96D71 796 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 PEX11GQ96HA9 241 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 FAR2Q96K12 515 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 QRFPRQ96P65 431 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 CDK15Q96Q40 435 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 TMEM237Q96Q45 408 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 F2RL3Q96RI0 385 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 NPLQ9BXD5 320 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 VN1R1Q9GZP7 353 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 SLC25A18Q9H1K4 315 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 LANCL2Q9NS86 450 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 FBXL4Q9UKA2 621 aa17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 PCDHGA9Q9Y5G4 932 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-209ENST00000503346 SMG1Q96Q15 3661 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 LOC102723996A0A087X1L8 192 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 EIF4E1BA6NMX2 242 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 G3V2L1 256 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 PLIN3O60664 434 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 ALOX12BO75342 701 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 ACPPP15309 386 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 IMPDH1P20839 514 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 CCL11P51671 97 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 PLA2G16P53816 162 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 CDH13P55290 713 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 SOX8P57073 446 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 TGM3Q08188 693 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 CPSF6Q16630 551 aaKnown RBP eCLIP17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 TUBB8Q3ZCM7 444 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 MINDY4Q4G0A6 757 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 GGTA1PQ4G0N0 100 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 UNC50Q53HI1 259 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 ZYG11AQ6WRX3 759 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 CA13Q8N1Q1 262 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 CLEC1AQ8NC01 280 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 SRFBP1Q8NEF9 429 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 C9orf43Q8TAL5 461 aaPredicted RBP17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 WDR20Q8TBZ3 569 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 CCDC126Q96EE4 140 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 L3HYPDHQ96EM0 354 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 CMTM7Q96FZ5 175 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 MAGEB10Q96LZ2 347 aaPredicted RBP17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 KCNC2Q96PR1 638 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 MESP1Q9BRJ9 268 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 MLXIPLQ9NP71 852 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms