RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 OR4D1Q15615 310 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 C1QL3Q5VWW1 255 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 ADNP2Q6IQ32 1131 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 TUBA3EQ6PEY2 450 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.26■□□□□ 0.032e-6■■■■■ 37.5
SCLT1-204ENST00000503215 CYP4X1Q8N118 509 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 TBC1D19Q8N5T2 526 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 M1APQ8TC57 530 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 PTCHD1Q96NR3 888 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 LPAR4Q99677 370 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 TMEM79Q9BSE2 394 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 DERL2Q9GZP9 239 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 WHRNQ9P202 907 aa15.26■□□□□ 0.03
SCLT1-204ENST00000503215 ZG16O60844 167 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 RASAL1O95294 804 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 TBX6O95947 436 aaPredicted RBP15.25■□□□□ 0.03
SCLT1-204ENST00000503215 STSP08842 583 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 CCDC166P0CW27 439 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 C1GALT1C1LP0DN25 315 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 HNRNPH1P31943 449 aaKnown RBP15.25■□□□□ 0.03
SCLT1-204ENST00000503215 DCTP40126 519 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 AP2B1P63010 937 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 POU4F1Q01851 419 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 RUNX2Q13950 521 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 TGFBIQ15582 683 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 EXT1Q16394 746 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 ZNF766Q5HY98 468 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 ZNF468Q5VIY5 522 aaPredicted RBP15.25■□□□□ 0.03
SCLT1-204ENST00000503215 SPINK14Q6IE38 97 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 ABHD13Q7L211 337 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 ADAMTSL2Q86TH1 951 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 FJX1Q86VR8 437 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 KLHDC8AQ8IYD2 350 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 BBOF1Q8ND07 529 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 MDS2Q8NDY4 140 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 ZNF354BQ96LW1 612 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 NECTIN3Q9NQS3 549 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 KLHL1Q9NR64 748 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 TEKT2Q9UIF3 430 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 ITPR2Q14571 2701 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 CRYBG3Q68DQ2 2970 aa15.25■□□□□ 0.03
SCLT1-204ENST00000503215 UQCRHLA0A096LP55 91 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 FAM159BA6NKW6 160 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 A8MUA0 341 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 PRMT3O60678 531 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 UNC5CO95185 931 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 SERPINA6P08185 405 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 HNMTP50135 292 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 BTN3A2P78410 334 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 SLBPQ14493 270 aaKnown RBP eCLIP15.24■□□□□ 0.03
SCLT1-204ENST00000503215 GFRALQ6UXV0 394 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 C3orf62Q6ZUJ4 267 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 FRA10AC1Q70Z53 315 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 VN1R5Q7Z5H4 357 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 CA13Q8N1Q1 262 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 TRPV3Q8NET8 790 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 GPR22Q99680 433 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 CDCP1Q9H5V8 836 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 POPDC3Q9HBV1 291 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 NSMCE4AQ9NXX6 385 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 ABI3Q9P2A4 366 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 PRDM4Q9UKN5 801 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 ASB1Q9Y576 335 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 CELSR2Q9HCU4 2923 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 IGKV3D-11A0A0A0MRZ8 115 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 GABRR3A8MPY1 467 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 CD1DP15813 335 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 GNAZP19086 355 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 HSPA7P48741 367 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 SLC12A2P55011 1212 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 PLTPP55058 493 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 CALCOCO2Q13137 446 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 OR1C1Q15619 314 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 INAQ16352 499 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 MEP1AQ16819 746 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 ZDHHC24Q6UX98 284 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 TMIGD1Q6UXZ0 262 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 GPSM1Q86YR5 675 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 TMEM52Q8NDY8 209 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 NFAM1Q8NET5 270 aaPredicted RBP15.24■□□□□ 0.03
SCLT1-204ENST00000503215 SUN3Q8TAQ9 357 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 ELP5Q8TE02 316 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 MS4A6EQ96DS6 147 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 RBBP8Q99708 897 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 CPNE1Q99829 537 aa15.24■□□□□ 0.03
SCLT1-204ENST00000503215 ZNF490Q9ULM2 529 aaPredicted RBP15.24■□□□□ 0.03
SCLT1-204ENST00000503215 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.24■□□□□ 0.03
SCLT1-204ENST00000503215 LRIT2A6NDA9 550 aa15.23■□□□□ 0.03
SCLT1-204ENST00000503215 TGFBR3LH3BV60 316 aa15.23■□□□□ 0.03
SCLT1-204ENST00000503215 EIF3HO15372 352 aaKnown RBP eCLIP15.23■□□□□ 0.03
SCLT1-204ENST00000503215 H2AFYO75367 372 aaKnown RBP15.23■□□□□ 0.03
SCLT1-204ENST00000503215 RNH1P13489 461 aaKnown RBP15.23■□□□□ 0.03
SCLT1-204ENST00000503215 EPORP19235 508 aa15.23■□□□□ 0.03
SCLT1-204ENST00000503215 CD22P20273 847 aa15.23■□□□□ 0.03
SCLT1-204ENST00000503215 JAK1P23458 1154 aa15.23■□□□□ 0.03
SCLT1-204ENST00000503215 PPP2R1BP30154 601 aa15.23■□□□□ 0.03
SCLT1-204ENST00000503215 GP5P40197 560 aa15.23■□□□□ 0.03
SCLT1-204ENST00000503215 HNRNPFP52597 415 aaKnown RBP15.23■□□□□ 0.03
SCLT1-204ENST00000503215 DLG1Q12959 904 aa15.23■□□□□ 0.03
SCLT1-204ENST00000503215 EFTUD2Q15029 972 aaKnown RBP eCLIP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms