RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 FBLP22087 321 aaKnown RBP13.44□□□□□ -0.26
RNF4-202ENST00000502316 ITPKBP27987 946 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 PTPN4P29074 926 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 SERPINB5P36952 375 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 CCR10P46092 362 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 AVPR1BP47901 424 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 ARFIP1P53367 373 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 UCNP55089 124 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 RPS15P62841 145 aaKnown RBP13.44□□□□□ -0.26
RNF4-202ENST00000502316 SKP1P63208 163 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 PHEXP78562 749 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 IFT88Q13099 833 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 DEFB134Q4QY38 66 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 CRTC2Q53ET0 693 aaPredicted RBP13.44□□□□□ -0.26
RNF4-202ENST00000502316 TMEM35AQ53FP2 167 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 DEPDC1Q5TB30 811 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 ARHGAP40Q5TG30 622 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 ABHD17CQ6PCB6 329 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 GOLGA6L1Q8N7Z2 621 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 ENDOVQ8N8Q3 282 aaKnown RBP13.44□□□□□ -0.26
RNF4-202ENST00000502316 CDYL2Q8N8U2 506 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 CCT6BQ92526 530 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 MMABQ96EY8 250 aaPredicted RBP13.44□□□□□ -0.26
RNF4-202ENST00000502316 MTERF1Q99551 399 aaKnown RBP13.44□□□□□ -0.26
RNF4-202ENST00000502316 CLK4Q9HAZ1 481 aaKnown RBP13.44□□□□□ -0.26
RNF4-202ENST00000502316 MID1IP1Q9NPA3 183 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 IL17BQ9UHF5 180 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 SNX6Q9UNH7 406 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 FARSAQ9Y285 508 aaKnown RBP13.44□□□□□ -0.26
RNF4-202ENST00000502316 NAALAD2Q9Y3Q0 740 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 MAP4K5Q9Y4K4 846 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 MAU2Q9Y6X3 613 aa13.44□□□□□ -0.26
RNF4-202ENST00000502316 NBEAQ8NFP9 2946 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 VSTM2BA6NLU5 285 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 SGK494L7N484 410 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 ERI3O43414 337 aaKnown RBP13.43□□□□□ -0.26
RNF4-202ENST00000502316 TGFB1P01137 390 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 PTX3P26022 381 aaPredicted RBP13.43□□□□□ -0.26
RNF4-202ENST00000502316 TSFMP43897 325 aaKnown RBP13.43□□□□□ -0.26
RNF4-202ENST00000502316 NEK2P51955 445 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 WDR4P57081 412 aaKnown RBP13.43□□□□□ -0.26
RNF4-202ENST00000502316 RAB8AP61006 207 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 RPS13P62277 151 aaKnown RBP13.43□□□□□ -0.26
RNF4-202ENST00000502316 ZNF33BQ06732 778 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 CUL3Q13618 768 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 DDX39BQ13838 428 aaKnown RBP13.43□□□□□ -0.26
RNF4-202ENST00000502316 RCN2Q14257 317 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 SLC9A5Q14940 896 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 BROXQ5VW32 411 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 KHDRBS2Q5VWX1 349 aaKnown RBP13.43□□□□□ -0.26
RNF4-202ENST00000502316 TTC19Q6DKK2 380 aaPredicted RBP13.43□□□□□ -0.26
RNF4-202ENST00000502316 TRIM40Q6P9F5 258 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 ZCCHC23Q6ZST2 131 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 CHSY3Q70JA7 882 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 UBE3DQ7Z6J8 389 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 NUDCD3Q8IVD9 361 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 RNF175Q8N4F7 328 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 SRFBP1Q8NEF9 429 aaKnown RBP13.43□□□□□ -0.26
RNF4-202ENST00000502316 METTL6Q8TCB7 284 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 SNRNP27Q8WVK2 155 aaKnown RBP13.43□□□□□ -0.26
RNF4-202ENST00000502316 COL26A1Q96A83 441 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 QRFPRQ96P65 431 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 KCNC2Q96PR1 638 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 F2RL3Q96RI0 385 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 SPSB2Q99619 263 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 TGIF2Q9GZN2 237 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 ACBD3Q9H3P7 528 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 ACTL8Q9H568 366 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 ELOVL6Q9H5J4 265 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 BRF2Q9HAW0 419 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 TNFRSF12AQ9NP84 129 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 MKKSQ9NPJ1 570 aaPredicted RBP13.43□□□□□ -0.26
RNF4-202ENST00000502316 CTSFQ9UBX1 484 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 ZNF282Q9UDV7 671 aaPredicted RBP13.43□□□□□ -0.26
RNF4-202ENST00000502316 GPN3Q9UHW5 284 aaPredicted RBP13.43□□□□□ -0.26
RNF4-202ENST00000502316 NXT1Q9UKK6 140 aaKnown RBP13.43□□□□□ -0.26
RNF4-202ENST00000502316 TCFL5Q9UL49 500 aa13.43□□□□□ -0.26
RNF4-202ENST00000502316 SERTM1A2A2V5 107 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 MANBAO00462 879 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 RDH16O75452 317 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 SEMA3DO95025 777 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 SCELO95171 688 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 ETHE1O95571 254 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 B3GALT4O96024 378 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 KRT6AP02538 564 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 KRT6BP04259 564 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 HSD3B1P14060 373 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 HSD3B2P26439 372 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 ARRB2P32121 409 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 KRT6CP48668 564 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 FOXA1P55317 472 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 TMPRSS3P57727 454 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 TGM3Q08188 693 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 NKG7Q16617 165 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 ST3GAL2Q16842 350 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 ARL13AQ5H913 290 aaPredicted RBP13.42□□□□□ -0.26
RNF4-202ENST00000502316 MLIPQ5VWP3 458 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 CES4AQ5XG92 561 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 ANKRD42Q8N9B4 389 aa13.42□□□□□ -0.26
RNF4-202ENST00000502316 OR2Y1Q8NGV0 311 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms