RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 ADAMTS5Q9UNA0 930 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 LAMA3Q16787 3333 aa4.09□□□□□ -1.76
HMGB1P21-201ENST00000502313 A0A087X0K7 114 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 A0A1B0GTQ1 180 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 KANSL1LA0AUZ9 987 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 SSC5DA1L4H1 1573 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 ARHGEF35A5YM69 484 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 BTBD17A6NE02 478 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 TMEM202A6NGA9 273 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 OR52A4PA6NMU1 304 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 ANKRD30BLA7E2S9 258 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 VWC2LB2RUY7 222 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 H3BMM5 538 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 GOLGA8SH3BPF8 625 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 J3QR06 171 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 M0QZ24 198 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 NDUFS8O00217 210 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 MAP2K7O14733 419 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 ZNF208O43345 1280 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 AKR7A2O43488 359 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 MAST3O60307 1309 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 TSPAN1O60635 241 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 FRAT2O75474 233 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 PDE9AO76083 593 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 RGS11O94810 467 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 UFL1O94874 794 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 GSRP00390 522 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 OTCP00480 354 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 PROS1P07225 676 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 CA3P07451 260 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 CHRNGP07510 517 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 NUDT17P0C025 328 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 HKR1P10072 659 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 AKR1A1P14550 325 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 GCFC2P16383 781 aaKnown RBP4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 TNNI3P19429 210 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 LONP1P36776 959 aaKnown RBP4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 ABCG1P45844 678 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 IER3P46695 156 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 SLC1A6P48664 564 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 NR2C2P49116 596 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 RGS4P49798 205 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 SUCLG1P53597 346 aaKnown RBP4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 CNTNAP1P78357 1384 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 ABATP80404 500 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 CFHR3Q02985 330 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 SLC34A1Q06495 639 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 BST1Q10588 318 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 FUT7Q11130 342 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 PDS5AQ29RF7 1337 aaKnown RBP4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 RFX7Q2KHR2 1363 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 ANKRD55Q3KP44 614 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 FSCBQ5H9T9 825 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 PCID2Q5JVF3 399 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 SPDYCQ5MJ68 293 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 FAM46CQ5VWP2 391 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 C18orf63Q68DL7 685 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 PRR27Q6MZM9 219 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 MFSD12Q6NUT3 480 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 DLK2Q6UY11 383 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 LINGO2Q7L985 606 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 SLC29A4Q7RTT9 530 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 PHLDB2Q86SQ0 1253 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 TMPRSS11BQ86T26 416 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 LONP2Q86WA8 852 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 CCDC25Q86WR0 208 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 MEX3DQ86XN8 651 aaKnown RBP4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 SFTPA1Q8IWL2 248 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 OFCC1Q8IZS5 231 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 BEST2Q8NFU1 509 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 OR1J2Q8NGS2 313 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 VANGL1Q8TAA9 524 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 IL17DQ8TAD2 202 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 GOLGA5Q8TBA6 731 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 RAB3IL1Q8TBN0 382 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 HDAC7Q8WUI4 952 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 CACTINQ8WUQ7 758 aaKnown RBP4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 DPF1Q92782 380 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 KIAA1143Q96AT1 154 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 MOB3AQ96BX8 217 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 WWC2-AS2Q96NR7 200 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 BTBD9Q96Q07 612 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 RASL10BQ96S79 203 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 TMEM79Q9BSE2 394 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 ALG12Q9BV10 488 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 PAPPA2Q9BXP8 1791 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 IDI2Q9BXS1 227 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 SLC2A11Q9BYW1 496 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 NMNAT2Q9BZQ4 307 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 TM6SF1Q9BZW5 370 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 PKIBQ9C010 78 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 SLC39A8Q9C0K1 460 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 WWTR1Q9GZV5 400 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 MAGT1Q9H0U3 335 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 DPAGT1Q9H3H5 408 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 DPEP3Q9H4B8 488 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 ZNF703Q9H7S9 590 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 CALHM2Q9HA72 323 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 HHATLQ9HCP6 504 aa4.08□□□□□ -1.76
HMGB1P21-201ENST00000502313 HINT3Q9NQE9 182 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms