RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 RNF224P0DH78 156 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 SMIM10L1P0DMW3 83 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 MYBL2P10244 700 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 RNH1P13489 461 aaKnown RBP7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 EDN3P14138 238 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 GSTM2P28161 218 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 GGT5P36269 586 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 MAGEA4P43358 317 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 HSPA7P48741 367 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 OR4D2P58180 307 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 RAB10P61026 200 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 STXBP1P61764 594 aaKnown RBP7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 NAB1Q13506 487 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 SLBPQ14493 270 aaKnown RBP eCLIP7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 SLMAPQ14BN4 828 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 OR4D1Q15615 310 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 TRADDQ15628 312 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 ZKSCAN8Q15776 578 aaPredicted RBP7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 FBXO48Q5FWF7 155 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 CDKL4Q5MAI5 379 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 SULT1C3Q6IMI6 304 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 H3F3CQ6NXT2 135 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 C8orf74Q6P047 294 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 ZDHHC24Q6UX98 284 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 TMIGD1Q6UXZ0 262 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 SLCO4C1Q6ZQN7 724 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 QSOX2Q6ZRP7 698 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 RAPH1Q70E73 1250 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 CTAGE6Q86UF2 777 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 GPSM1Q86YR5 675 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 KRT78Q8N1N4 520 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 PPM1NQ8N819 430 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 FBF1Q8TES7 1133 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 CREB3L4Q8TEY5 395 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 CCT6BQ92526 530 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 GAL3ST3Q96A11 431 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 KIAA1191Q96A73 305 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 SMIM10Q96HG1 83 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 UBXN10Q96LJ8 280 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 ZNF354BQ96LW1 612 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 C5orf34Q96MH7 638 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 PTCHD1Q96NR3 888 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 KLHL31Q9H511 634 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 NT5DC2Q9H857 520 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 CLK4Q9HAZ1 481 aaKnown RBP7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 MMP25Q9NPA2 562 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 OLAHQ9NV23 265 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 DNAJC11Q9NVH1 559 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 CD274Q9NZQ7 290 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 ABI3Q9P2A4 366 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 PLEKHB1Q9UF11 243 aaPredicted RBP7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 ERRFI1Q9UJM3 462 aaPredicted RBP7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 RNF112Q9ULX5 631 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 SLC5A6Q9Y289 635 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 HIVEP3Q5T1R4 2406 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 SVILO95425 2214 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 CROCCQ5TZA2 2017 aa7.96□□□□□ -1.13
HMGXB4-207ENST00000498212 A0A088AWK7 358 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 ESYT3A0FGR9 886 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 ANKDD1BA6NHY2 528 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 TAPBPO15533 448 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 CCNT2O60583 730 aaKnown RBP7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 PRMT3O60678 531 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 PRAMEF2O60811 474 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 STK16O75716 305 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 RASAL1O95294 804 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 LDLRP01130 860 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 ZNF10P21506 573 aaPredicted RBP7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 HNRNPH1P31943 449 aaKnown RBP7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 HPDP32754 393 aaPredicted RBP7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 SLC26A5P58743 744 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 TAS2R50P59544 299 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 BTN3A2P78410 334 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 BTG2P78543 158 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 SLC7A5Q01650 507 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 EFTUD2Q15029 972 aaKnown RBP eCLIP7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 PDK4Q16654 411 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 MEP1AQ16819 746 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 ACER2Q5QJU3 275 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 ZNF324BQ6AW86 544 aaPredicted RBP7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 FCRLBQ6BAA4 426 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 CMC1Q7Z7K0 106 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 TBC1D1Q86TI0 1168 aaPredicted RBP7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 CRLF3Q8IUI8 442 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 BEST3Q8N1M1 668 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 CA13Q8N1Q1 262 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 SLC5A8Q8N695 610 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 SNX31Q8N9S9 440 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 PDPRQ8NCN5 879 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 STAG3L4Q8TBR4 150 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 NR4A3Q92570 626 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 EXT2Q93063 718 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 ESAMQ96AP7 390 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 PTCD3Q96EY7 689 aaKnown RBP7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 SEC16BQ96JE7 1060 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 FAR2Q96K12 515 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 C16orf45Q96MC5 204 aaPredicted RBP7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 TAAR6Q96RI8 345 aa7.96□□□□□ -1.14
HMGXB4-207ENST00000498212 SLX1AQ9BQ83 275 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms