RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 EXT1Q16394 746 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 SPANXN3Q5MJ09 141 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 HECTD2Q5U5R9 776 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 ZNF227Q86WZ6 799 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 PALM2Q8IXS6 379 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 ZNF808Q8N4W9 903 aaPredicted RBP17.4■□□□□ 0.38
PRKCB-209ENST00000498058 FBXO36Q8NEA4 188 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 ADAMTS18Q8TE60 1221 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 NEIL2Q969S2 332 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 FBXL8Q96CD0 374 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 CERS2Q96G23 380 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 GPR137Q96N19 417 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 FRMD6Q96NE9 622 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 OR1F2PQ96R84 312 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 LPAR4Q99677 370 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 UTP23Q9BRU9 249 aaKnown RBP17.4■□□□□ 0.38
PRKCB-209ENST00000498058 HAUS8Q9BT25 410 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 CDCP1Q9H5V8 836 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 ARL15Q9NXU5 204 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 RAB21Q9UL25 225 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 CHMP2BQ9UQN3 213 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 ZNF835Q9Y2P0 537 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 KLF2Q9Y5W3 355 aaPredicted RBP17.4■□□□□ 0.38
PRKCB-209ENST00000498058 TEX264Q9Y6I9 313 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 DCHS2Q6V1P9 2916 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 OTOGQ6ZRI0 2925 aa17.4■□□□□ 0.38
PRKCB-209ENST00000498058 TRBC2A0A5B9 178 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 FAM227AF5H4B4 570 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 CTIFO43310 598 aaKnown RBP17.39■□□□□ 0.37
PRKCB-209ENST00000498058 ERLIN1O75477 346 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 GUCA1CO95843 209 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 FHP07954 510 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 SNRPB2P08579 225 aaKnown RBP17.39■□□□□ 0.37
PRKCB-209ENST00000498058 GSTA2P09210 222 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 ALOX12P18054 663 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 GRK3P35626 688 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 MAGEA4P43358 317 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 SCTRP47872 440 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 OR4D2P58180 307 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 ACTN3Q08043 901 aaPredicted RBP17.39■□□□□ 0.37
PRKCB-209ENST00000498058 HERC3Q15034 1050 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 RNFT1Q5M7Z0 435 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 EMBQ6PCB8 327 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 SBSNQ6UWP8 590 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 BNC2Q6ZN30 1099 aaPredicted RBP17.39■□□□□ 0.37
PRKCB-209ENST00000498058 GALNTL5Q7Z4T8 443 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 RELL1Q8IUW5 271 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 SIAH3Q8IW03 269 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 CHERPQ8IWX8 916 aaKnown RBP17.39■□□□□ 0.37
PRKCB-209ENST00000498058 GPATCH11Q8N954 259 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 ANKRD53Q8N9V6 530 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 GABPB2Q8TAK5 448 aaPredicted RBP17.39■□□□□ 0.37
PRKCB-209ENST00000498058 NT5CQ8TCD5 201 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 ELP5Q8TE02 316 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 UTP15Q8TED0 518 aaKnown RBP17.39■□□□□ 0.37
PRKCB-209ENST00000498058 TBC1D20Q96BZ9 403 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 TSNARE1Q96NA8 513 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 KLHL31Q9H511 634 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 SUCOQ9UBS9 1254 aaKnown RBP17.39■□□□□ 0.37
PRKCB-209ENST00000498058 CACNA1CQ13936 2221 aa17.39■□□□□ 0.37
PRKCB-209ENST00000498058 CSMD2Q7Z408 3487 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 NPIPA5E9PKD4 350 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 C19orf84I3L1E1 186 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 B4GALT2O60909 372 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 SERPIND1P05546 499 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 HIST1H2AGP0C0S8 130 aaPredicted RBP17.38■□□□□ 0.37
PRKCB-209ENST00000498058 SMIM10L1P0DMW3 83 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 MYBL2P10244 700 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 POU3F2P20265 443 aaPredicted RBP17.38■□□□□ 0.37
PRKCB-209ENST00000498058 HIST1H2ADP20671 130 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 IL10P22301 178 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 HTR1EP28566 365 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 IL2P60568 153 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 PDAP1Q13442 181 aaKnown RBP17.38■□□□□ 0.37
PRKCB-209ENST00000498058 PWP1Q13610 501 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 ZNF630Q2M218 657 aaPredicted RBP17.38■□□□□ 0.37
PRKCB-209ENST00000498058 KIAA0408Q6ZU52 694 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.38■□□□□ 0.37
PRKCB-209ENST00000498058 GALNT7Q86SF2 657 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 ANKMY2Q8IV38 441 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 CFAP36Q96G28 342 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 SMIM10Q96HG1 83 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 HIST1H2AHQ96KK5 128 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 HIST1H2AJQ99878 128 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 H2AFJQ9BTM1 129 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 NPIPA1Q9UND3 350 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 VWA7Q9Y334 891 aa17.38■□□□□ 0.37
PRKCB-209ENST00000498058 TEP1Q99973 2627 aaKnown RBP17.38■□□□□ 0.37
PRKCB-209ENST00000498058 SP1P08047 785 aa17.37■□□□□ 0.37
PRKCB-209ENST00000498058 TPP2P29144 1249 aaPredicted RBP17.37■□□□□ 0.37
PRKCB-209ENST00000498058 PHBP35232 272 aa17.37■□□□□ 0.37
PRKCB-209ENST00000498058 HNF4AP41235 474 aa17.37■□□□□ 0.37
PRKCB-209ENST00000498058 AP1S2P56377 157 aa17.37■□□□□ 0.37
PRKCB-209ENST00000498058 RAB8AP61006 207 aa17.37■□□□□ 0.37
PRKCB-209ENST00000498058 HSF1Q00613 529 aa17.37■□□□□ 0.37
PRKCB-209ENST00000498058 REEP5Q00765 189 aa17.37■□□□□ 0.37
PRKCB-209ENST00000498058 ALDH6A1Q02252 535 aaKnown RBP17.37■□□□□ 0.37
PRKCB-209ENST00000498058 PPP1R3AQ16821 1122 aa17.37■□□□□ 0.37
PRKCB-209ENST00000498058 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.37■□□□□ 0.37
PRKCB-209ENST00000498058 Q6ZPB1 254 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms