RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 KLHL38Q2WGJ6 581 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 SLC26A11Q86WA9 606 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 CYP4X1Q8N118 509 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 TMEM156Q8N614 296 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 CREB3L4Q8TEY5 395 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 FAM222BQ8WU58 562 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 TBC1D20Q96BZ9 403 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 ZNF395Q9H8N7 513 aaPredicted RBP15.34■□□□□ 0.05
VIM-208ENST00000497849 PLEKHF2Q9H8W4 249 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 CHRAC1Q9NRG0 131 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 FAM114A2Q9NRY5 505 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 NBEAL1Q6ZS30 2694 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 HIVEP2P31629 2446 aa15.34■□□□□ 0.05
VIM-208ENST00000497849 ZNF839A8K0R7 811 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 ERI2A8K979 691 aaKnown RBP15.33■□□□□ 0.04
VIM-208ENST00000497849 FAM171A2A8MVW0 826 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 SLC16A5O15375 505 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 LCMT2O60294 686 aaKnown RBP15.33■□□□□ 0.04
VIM-208ENST00000497849 NDUFS3O75489 264 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 ITGA10O75578 1167 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 IGHG3P01860 377 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 CATP04040 527 aaKnown RBP15.33■□□□□ 0.04
VIM-208ENST00000497849 TUBB4AP04350 444 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 FMO4P31512 558 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 COILP38432 576 aaPredicted RBP15.33■□□□□ 0.04
VIM-208ENST00000497849 PEX19P40855 299 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 BTG2P78543 158 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 THEMIS2Q5TEJ8 643 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 KIAA0408Q6ZU52 694 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 CAMKVQ8NCB2 501 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 APCDD1LQ8NCL9 501 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 PSD4Q8NDX1 1056 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 THAP11Q96EK4 314 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 C16orf45Q96MC5 204 aaPredicted RBP15.33■□□□□ 0.04
VIM-208ENST00000497849 PTCHD1Q96NR3 888 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 SARGQ9BW04 601 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 NEUROD4Q9HD90 331 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 KCMF1Q9P0J7 381 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 ADAM21Q9UKJ8 722 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 JRKLQ9Y4A0 524 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 SLC22A7Q9Y694 548 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 MXRA5Q9NR99 2828 aa15.33■□□□□ 0.04
VIM-208ENST00000497849 A0A0G2JMM0 328 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 A0A1B0GVC2 190 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 A0A1W2PPB8 328 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 A0A1W2PRS3 328 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 KIR3DP1A8MWS1 328 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 KIF2AO00139 706 aaPredicted RBP15.32■□□□□ 0.04
VIM-208ENST00000497849 B4GALT2O60909 372 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 OLR1P78380 273 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 NKX6-1P78426 367 aaPredicted RBP15.32■□□□□ 0.04
VIM-208ENST00000497849 PPP1R21Q6ZMI0 780 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 ASPGQ86U10 573 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 SPNS2Q8IVW8 549 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 CIARTQ8N365 385 aaPredicted RBP15.32■□□□□ 0.04
VIM-208ENST00000497849 MPP5Q8N3R9 675 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 AFAP1L2Q8N4X5 818 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 RELL2Q8NC24 303 aaPredicted RBP15.32■□□□□ 0.04
VIM-208ENST00000497849 FBXO15Q8NCQ5 510 aaPredicted RBP15.32■□□□□ 0.04
VIM-208ENST00000497849 OR2M7Q8NG81 312 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 SLC13A3Q8WWT9 602 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 LPGAT1Q92604 370 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 COX4I2Q96KJ9 171 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 SH3GL2Q99962 352 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 TTTY12Q9BZ98 90 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 ATG10Q9H0Y0 220 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 ETNK1Q9HBU6 452 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 TIMMDC1Q9NPL8 285 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 TREX1Q9NSU2 369 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 ZNF223Q9UK11 482 aaPredicted RBP15.32■□□□□ 0.04
VIM-208ENST00000497849 SH2B3Q9UQQ2 575 aa15.32■□□□□ 0.04
VIM-208ENST00000497849 TRBV11-1A0A0K0K1C0 115 aa15.31■□□□□ 0.04
VIM-208ENST00000497849 TCRBV16S1A1N1A0A5B0 115 aa15.31■□□□□ 0.04
VIM-208ENST00000497849 A8MUA0 341 aa15.31■□□□□ 0.04
VIM-208ENST00000497849 ACOT7O00154 380 aa15.31■□□□□ 0.04
VIM-208ENST00000497849 CHST10O43529 356 aa15.31■□□□□ 0.04
VIM-208ENST00000497849 CEP104O60308 925 aa15.31■□□□□ 0.04
VIM-208ENST00000497849 GALR3O60755 368 aaPredicted RBP15.31■□□□□ 0.04
VIM-208ENST00000497849 GLSO94925 669 aaPredicted RBP15.31■□□□□ 0.04
VIM-208ENST00000497849 B3GALT4O96024 378 aa15.31■□□□□ 0.04
VIM-208ENST00000497849 JAK1P23458 1154 aa15.31■□□□□ 0.04
VIM-208ENST00000497849 IMPA1P29218 277 aa15.31■□□□□ 0.04
VIM-208ENST00000497849 DCAF7P61962 342 aa15.31■□□□□ 0.04
VIM-208ENST00000497849 PLGLB1Q02325 96 aa15.31■□□□□ 0.04
VIM-208ENST00000497849 C1orf185Q5T7R7 199 aa15.31■□□□□ 0.04
VIM-208ENST00000497849 QSOX2Q6ZRP7 698 aa15.31■□□□□ 0.04
VIM-208ENST00000497849 RGS9BPQ6ZS82 235 aa15.31■□□□□ 0.04
VIM-208ENST00000497849 TRILQ7L0X0 811 aa15.31■□□□□ 0.04
VIM-208ENST00000497849 SLC35B2Q8TB61 432 aa15.31■□□□□ 0.04
VIM-208ENST00000497849 MS4A14Q96JA4 679 aa15.31■□□□□ 0.04
VIM-208ENST00000497849 CNPPD1Q9BV87 410 aa15.31■□□□□ 0.04
VIM-208ENST00000497849 RRAGDQ9NQL2 400 aaPredicted RBP15.31■□□□□ 0.04
VIM-208ENST00000497849 B4GALT7Q9UBV7 327 aa15.31■□□□□ 0.04
VIM-208ENST00000497849 IGKV3D-11A0A0A0MRZ8 115 aa15.3■□□□□ 0.04
VIM-208ENST00000497849 ARID1AO14497 2285 aa15.3■□□□□ 0.04
VIM-208ENST00000497849 WDR1O75083 606 aa15.3■□□□□ 0.04
VIM-208ENST00000497849 SYF2O95926 243 aaKnown RBP15.3■□□□□ 0.04
VIM-208ENST00000497849 CD53P19397 219 aa15.3■□□□□ 0.04
VIM-208ENST00000497849 CHRM3P20309 590 aa15.3■□□□□ 0.04
VIM-208ENST00000497849 MAOAP21397 527 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms