RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	TBC1D20	Q96BZ9	403 aa		10.32	□□□□□ -0.76
DCTN1-223	ENST00000495643	PTCD3	Q96EY7	689 aa	Known RBP	10.32	□□□□□ -0.76
DCTN1-223	ENST00000495643	SEC16B	Q96JE7	1060 aa		10.32	□□□□□ -0.76
DCTN1-223	ENST00000495643	GPR78	Q96P69	363 aa		10.32	□□□□□ -0.76
DCTN1-223	ENST00000495643	WDR77	Q9BQA1	342 aa	Predicted RBP	10.32	□□□□□ -0.76
DCTN1-223	ENST00000495643	TUBB6	Q9BUF5	446 aa		10.32	□□□□□ -0.76
DCTN1-223	ENST00000495643	PCDHGA10	Q9Y5H3	936 aa		10.32	□□□□□ -0.76
DCTN1-223	ENST00000495643	USP9X	Q93008	2570 aa	Predicted RBP	10.32	□□□□□ -0.76
DCTN1-223	ENST00000495643	RP1L1	Q8IWN7	2480 aa	Predicted RBP	10.32	□□□□□ -0.76
DCTN1-223	ENST00000495643	UTP20	O75691	2785 aa	Known RBP	10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	HECTD1	Q9ULT8	2610 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643		A0A096LPK6	155 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	IGHV3-20	A0A0C4DH32	117 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	CCDC189	A1A4V9	331 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	MAGEB17	A8MXT2	336 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	SUPT3H	B4E1H0	165 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	CCNT2	O60583	730 aa	Known RBP	10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	SUPT3H	O75486	399 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	CLEC3A	O75596	197 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	CDC123	O75794	336 aa	Predicted RBP	10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	WFS1	O76024	890 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	SEC24D	O94855	1032 aa	Predicted RBP	10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	KLHL2	O95198	593 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	S100B	P04271	92 aa	Predicted RBP	10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	ICAM2	P13598	275 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	HNRNPH1	P31943	449 aa	Known RBP	10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	MAGEA12	P43365	314 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	STXBP1	P61764	594 aa	Known RBP	10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	SRSF1	Q07955	248 aa	Known RBP eCLIP	10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	PCDH1	Q08174	1060 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	CHIT1	Q13231	466 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	ABRAXAS2	Q15018	415 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	TBCC	Q15814	346 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	UAP1	Q16222	522 aa	Predicted RBP	10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	FAM83E	Q2M2I3	478 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	ADPRM	Q3LIE5	342 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	XKR6	Q5GH73	641 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	PLAG1	Q6DJT9	500 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	ADNP2	Q6IQ32	1131 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	LINC00696	Q6ZRV3	163 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	LRRC70	Q7Z2Q7	622 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	IQCK	Q8N0W5	287 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	SIRT6	Q8N6T7	355 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	EFCAB3	Q8N7B9	438 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	CEP112	Q8N8E3	955 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	DNAJB14	Q8TBM8	379 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	GAL3ST3	Q96A11	431 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	ISL2	Q96A47	359 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	SNRNP40	Q96DI7	357 aa	Known RBP	10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	MS4A6E	Q96DS6	147 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	C19orf60	Q96EN9	201 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	QRFPR	Q96P65	431 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	BARD1	Q99728	777 aa	Known RBP	10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	EFCAB11	Q9BUY7	163 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	RBCK1	Q9BYM8	510 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	ILKAP	Q9H0C8	392 aa	Predicted RBP	10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	RHBG	Q9H310	441 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	EPS8L2	Q9H6S3	715 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	PTGFRN	Q9P2B2	879 aa		10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	C19orf25	Q9UFG5	118 aa	Predicted RBP	10.31	□□□□□ -0.76
DCTN1-223	ENST00000495643	PTPN13	Q12923	2485 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	ANKDD1B	A6NHY2	528 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	SYCE1L	A8MT33	242 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	FAM227A	F5H4B4	570 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643		K7EPI3	171 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	KLK8	O60259	260 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	VPS4B	O75351	444 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	RNH1	P13489	461 aa	Known RBP	10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	GNLY	P22749	145 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	JAK1	P23458	1154 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	TYK2	P29597	1187 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	UQCRFS1	P47985	274 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	GLRB	P48167	497 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	SERPINB8	P50452	374 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	AP2B1	P63010	937 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	BTG2	P78543	158 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	LAPTM5	Q13571	262 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	RUNX2	Q13950	521 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	ACAP2	Q15057	778 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	NSDHL	Q15738	373 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	SFT2D3	Q587I9	215 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	B3GNTL1	Q67FW5	361 aa	Predicted RBP	10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	H3F3C	Q6NXT2	135 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	QSOX2	Q6ZRP7	698 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	CA13	Q8N1Q1	262 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	PLD6	Q8N2A8	252 aa	Known RBP	10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	CISD2	Q8N5K1	135 aa	Known RBP	10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	OR2L5	Q8NG80	312 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	DCAKD	Q8WVC6	231 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	HAS2	Q92819	552 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	TSLP	Q969D9	159 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	PAFAH2	Q99487	392 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	ASF1B	Q9NVP2	202 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	NFU1	Q9UMS0	254 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	VPS4A	Q9UN37	437 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	NTNG1	Q9Y2I2	539 aa		10.3	□□□□□ -0.76
DCTN1-223	ENST00000495643	IGKV3D-11	A0A0A0MRZ8	115 aa		10.29	□□□□□ -0.76
DCTN1-223	ENST00000495643		A0A0G2JN53	185 aa		10.29	□□□□□ -0.76
DCTN1-223	ENST00000495643	TCP11X1	B4DZS4	312 aa		10.29	□□□□□ -0.76
DCTN1-223	ENST00000495643	ERI3	O43414	337 aa	Known RBP	10.29	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms