RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 EFCAB8A8MWE9 144 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 TAPBPO15533 448 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 NEURL1O76050 574 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 RASAL1O95294 804 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 ICAM2P13598 275 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 PRF1P14222 555 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 NCF1P14598 390 aaPredicted RBP10.92□□□□□ -0.66
VTI1A-208ENST00000494728 GRNP28799 593 aaKnown RBP10.92□□□□□ -0.66
VTI1A-208ENST00000494728 SSTR1P30872 391 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 HNRNPH1P31943 449 aaKnown RBP10.92□□□□□ -0.66
VTI1A-208ENST00000494728 AHRP35869 848 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 CD96P40200 585 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 HNRNPFP52597 415 aaKnown RBP10.92□□□□□ -0.66
VTI1A-208ENST00000494728 OR4D2P58180 307 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 RGS1Q08116 209 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 SLBPQ14493 270 aaKnown RBP eCLIP10.92□□□□□ -0.66
VTI1A-208ENST00000494728 OR1C1Q15619 314 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 TOR1AIP1Q5JTV8 583 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 SPINK14Q6IE38 97 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 VN1R5Q7Z5H4 357 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 C17orf53Q8N3J3 647 aaPredicted RBP10.92□□□□□ -0.66
VTI1A-208ENST00000494728 TMEM52Q8NDY8 209 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 M1APQ8TC57 530 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 ELP5Q8TE02 316 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 ESAMQ96AP7 390 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 SCMH1Q96GD3 660 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 FRMD6Q96NE9 622 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 LPAR4Q99677 370 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 TRIM54Q9BYV2 358 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 FAM129AQ9BZQ8 928 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 DPH5Q9H2P9 285 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 GRHL1Q9NZI5 618 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 SH3BGRL2Q9UJC5 107 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 DYRK1BQ9Y463 629 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 ASB1Q9Y576 335 aa10.92□□□□□ -0.66
VTI1A-208ENST00000494728 HRNRQ86YZ3 2850 aaPredicted RBP10.91□□□□□ -0.66
VTI1A-208ENST00000494728 TCRBV16S1A1N1A0A5B0 115 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 GABRR3A8MPY1 467 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 CCDC188H7C350 402 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 RAD51CO43502 376 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 WDR47O94967 919 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 CD22P20273 847 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 TPP2P29144 1249 aaPredicted RBP10.91□□□□□ -0.66
VTI1A-208ENST00000494728 PPP2R1BP30154 601 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 AP2B1P63010 937 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 CDKL1Q00532 357 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 C2orf54Q08AI8 447 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 CBLBQ13191 982 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 RBBP5Q15291 538 aaKnown RBP10.91□□□□□ -0.66
VTI1A-208ENST00000494728 OR4D1Q15615 310 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 EXT1Q16394 746 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 MEP1AQ16819 746 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 RNFT1Q5M7Z0 435 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 SLCO4C1Q6ZQN7 724 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 QSOX2Q6ZRP7 698 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 NCCRP1Q6ZVX7 275 aaPredicted RBP10.91□□□□□ -0.66
VTI1A-208ENST00000494728 ABHD13Q7L211 337 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 CHERPQ8IWX8 916 aaKnown RBP10.91□□□□□ -0.66
VTI1A-208ENST00000494728 KLHDC8AQ8IYD2 350 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 CA13Q8N1Q1 262 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 NKAPQ8N5F7 415 aaKnown RBP10.91□□□□□ -0.66
VTI1A-208ENST00000494728 NFAM1Q8NET5 270 aaPredicted RBP10.91□□□□□ -0.66
VTI1A-208ENST00000494728 ITLN2Q8WWU7 325 aaPredicted RBP10.91□□□□□ -0.66
VTI1A-208ENST00000494728 RELTQ969Z4 430 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 RHBDF1Q96CC6 855 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 CCDC120Q96HB5 630 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 ZNF354BQ96LW1 612 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 RUNDC3BQ96NL0 473 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 EGFL8Q99944 293 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 AIF1LQ9BQI0 150 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 RHBGQ9H310 441 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 GPAMQ9HCL2 828 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 CTNNAL1Q9UBT7 734 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 SEC14L3Q9UDX4 400 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 TEKT2Q9UIF3 430 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 ZNF223Q9UK11 482 aaPredicted RBP10.91□□□□□ -0.66
VTI1A-208ENST00000494728 NCKAP5O14513 1909 aa10.91□□□□□ -0.66
VTI1A-208ENST00000494728 MAP1AP78559 2803 aaPredicted RBP10.9□□□□□ -0.66
VTI1A-208ENST00000494728 TRGV8A0A0C4DH27 118 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 TCRBV9S1A1TA0A576 114 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 ASPDHA6ND91 283 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 PABPN1LA6NDY0 278 aaKnown RBP10.9□□□□□ -0.66
VTI1A-208ENST00000494728 SAGE2PA6NJ88 616 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 A8MUA0 341 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 PRMT3O60678 531 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 EPORP19235 508 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 JAK1P23458 1154 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 CA7P43166 264 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 GPX6P59796 221 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 HSF1Q00613 529 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 RUNX2Q13950 521 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 EFTUD2Q15029 972 aaKnown RBP eCLIP10.9□□□□□ -0.66
VTI1A-208ENST00000494728 CDSNQ15517 529 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 TGFBIQ15582 683 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 TRADDQ15628 312 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 FRA10AC1Q70Z53 315 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 GALNTL5Q7Z4T8 443 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 ADAMTSL2Q86TH1 951 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 SIAH3Q8IW03 269 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 CYP4X1Q8N118 509 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms