RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 SLC6A5Q9Y345 797 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 SF3B6Q9Y3B4 125 aaKnown RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 A0A1B0GTQ1 180 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 FAM240BA0A1B0GVZ2 78 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 A0A1W2PQL4 384 aaPredicted RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 PLSCR5A0PG75 271 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 ZAR1LA6NP61 321 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 NFATC1O95644 943 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 DHFRP00374 187 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 CFDP00746 253 aaPredicted RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 RB1P06400 928 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 ADRA2AP08913 450 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 TSPAN19P0C672 248 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 LINC00032P0C843 101 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 LAG3P18627 525 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 EPHA2P29317 976 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 HOXC13P31276 330 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 TNFSF9P41273 254 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 CCT3P49368 545 aaKnown RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 MAN2A2P49641 1150 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 GEMP55040 296 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 ERVFC1P60507 584 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 SHC2P98077 582 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 ACSM1Q08AH1 577 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 KCNAB1Q14722 419 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 SMAD2Q15796 467 aaKnown RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 FAM187BQ17R55 369 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 FAM76BQ5HYJ3 339 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 TRIQKQ629K1 86 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 DHRS7BQ6IAN0 325 aaPredicted RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 SCYL2Q6P3W7 929 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 C5orf46Q6UWT4 87 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 MPZL3Q6UWV2 235 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 FAM92BQ6ZTR7 304 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 KIAA0907Q7Z7F0 614 aaPredicted RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 ZNF605Q86T29 641 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 SLC44A2Q8IWA5 706 aaPredicted RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 SKA3Q8IX90 412 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 C19orf18Q8NEA5 215 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 B3GNT7Q8NFL0 401 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 SLC39A7Q92504 469 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 RIT1Q92963 219 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 MRPS24Q96EL2 167 aaKnown RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 FAM129BQ96TA1 746 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 GAL3ST1Q99999 423 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 CINPQ9BW66 212 aaPredicted RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 ACTR6Q9GZN1 396 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 IKZF5Q9H5V7 419 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 BRD7Q9NPI1 651 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 PDP1Q9P0J1 537 aaPredicted RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 FTSJ1Q9UET6 329 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 PRKAG2Q9UGJ0 569 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 PCOLCE2Q9UKZ9 415 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 CBLCQ9ULV8 474 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 GABRQQ9UN88 632 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 MRPS7Q9Y2R9 242 aaKnown RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 PTGDR2Q9Y5Y4 395 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 C17orf113A0A1B0GUU1 675 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 A0A1B0GWJ7 208 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 KLRG2A4D1S0 409 aaPredicted RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 PCP4L1A6NKN8 68 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 NEDD8-MDP1E9PL57 170 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 DDX39AO00148 427 aaKnown RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 WRBO00258 174 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 CLN5O75503 358 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 THP07101 528 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 FABP1P07148 127 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 FBP1P09467 338 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 CNPP09543 421 aaKnown RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 NPR1P16066 1061 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 ZNF37AP17032 561 aaPredicted RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 OGNP20774 298 aaKnown RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 S100PP25815 95 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 AKT1P31749 480 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 RFX3P48380 749 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 VEGFCP49767 419 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 RPA4Q13156 261 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 TPBGQ13641 420 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 CAPSQ13938 189 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 PUM1Q14671 1186 aaKnown RBP eCLIP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 CDO1Q16878 200 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 GOLGA7BQ2TAP0 167 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 RHOUQ7L0Q8 258 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 GALNT5Q7Z7M9 940 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 Q8N402 240 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 C7orf31Q8N865 590 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 WDR36Q8NI36 951 aaKnown RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 ADAMTS19Q8TE59 1207 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 TRMT2BQ96GJ1 504 aaKnown RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 ITCHQ96J02 903 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 TCEAL7Q9BRU2 100 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 NT5C1AQ9BXI3 368 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 PRRG3Q9BZD7 231 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 TDRD3Q9H7E2 651 aaKnown RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 SLC35C2Q9NQQ7 365 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 PRDM9Q9NQV7 894 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 GSN-AS1Q9NRJ2 163 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 THSD1Q9NS62 852 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 CATSPERZQ9NTU4 200 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 PIH1D1Q9NWS0 290 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms