RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 PCLAFQ15004 111 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 TSNQ15631 228 aaKnown RBP11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 UBE2R2Q712K3 238 aaPredicted RBP11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 OVCH1Q7RTY7 1134 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 DCUN1D3Q8IWE4 304 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 LINC01555Q8NAE3 123 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 PDPRQ8NCN5 879 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 OR11G2Q8NGC1 345 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 CKAP2Q8WWK9 683 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 LURAP1Q96LR2 239 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 ATOH8Q96SQ7 321 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 TRMOQ9BU70 441 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 RAB11FIP5Q9BXF6 653 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 PARVBQ9HBI1 364 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 ZNF160Q9HCG1 818 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 OLAHQ9NV23 265 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 CD274Q9NZQ7 290 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 CPSF2Q9P2I0 782 aaKnown RBP11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 GALPQ9UBC7 116 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 PLCL2Q9UPR0 1127 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 TRGV8A0A0C4DH27 118 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 C19orf84I3L1E1 186 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 ZNHIT1O43257 154 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 MST1P26927 711 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 HSD17B2P37059 387 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 GNGT1P63211 74 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 GUCY1A3Q02108 690 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 TGFBIQ15582 683 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 OR4D1Q15615 310 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 CFAP157Q5JU67 520 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 ZNF324BQ6AW86 544 aaPredicted RBP11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 FCRL6Q6DN72 434 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 SULT1C3Q6IMI6 304 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 TLDC1Q6P9B6 456 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 FAM180AQ6UWF9 173 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 SBSNQ6UWP8 590 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 NCCRP1Q6ZVX7 275 aaPredicted RBP11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 VRK3Q8IV63 474 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 MCATQ8IVS2 390 aaKnown RBP11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 SHISA5Q8N114 240 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 AFAP1L2Q8N4X5 818 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 UBTD2Q8WUN7 234 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 ASB11Q8WXH4 323 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 EXT2Q93063 718 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 CCDC120Q96HB5 630 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 EGFL8Q99944 293 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 C17orf62Q9BQA9 187 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 LHPPQ9H008 270 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 MANSC1Q9H8J5 431 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 ZNF358Q9NW07 568 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 OXSMQ9NWU1 459 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 PTGFRNQ9P2B2 879 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 ADAM21Q9UKJ8 722 aa11.16□□□□□ -0.62
CSNK1E-212ENST00000494610 A8MT66 165 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 TARM1B6A8C7 271 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 G3V2L1 256 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 GFYI3L273 518 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 CDC7O00311 574 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 KLK8O60259 260 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 NPHS1O60500 1241 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 SHOX2O60902 331 aaPredicted RBP11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 IGHEP01854 428 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 SHMT2P34897 504 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 HK2P52789 917 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 HERVK_113P63132 956 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 YBX1P67809 324 aaKnown RBP11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 PMP22Q01453 160 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 SETDB1Q15047 1291 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 TLR1Q15399 786 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 CHI3L2Q15782 390 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 RBBP7Q16576 425 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 PPP1R3AQ16821 1122 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 ZXDCQ2QGD7 858 aaPredicted RBP11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 B3GNTL1Q67FW5 361 aaPredicted RBP11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 MRGPRGQ86SM5 289 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 LAPTM4BQ86VI4 370 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 C10orf107Q8IVU9 208 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 TBC1D21Q8IYX1 336 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 ZNF295-AS1Q8N0V1 137 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 SPATA6LQ8N4H0 392 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 SIRT6Q8N6T7 355 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 PSMF1Q92530 271 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 RELTQ969Z4 430 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 RAD51AP1Q96B01 352 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 L3HYPDHQ96EM0 354 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 CHMP6Q96FZ7 201 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 CCDC138Q96M89 665 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 ERVK-6Q9BXR3 956 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 EML4Q9HC35 981 aaKnown RBP11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 CUTCQ9NTM9 273 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 ARL15Q9NXU5 204 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 WWOXQ9NZC7 414 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 SPATA7Q9P0W8 599 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 POLG2Q9UHN1 485 aa11.15□□□□□ -0.62
CSNK1E-212ENST00000494610 A0A1B0GUH1 482 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 A0A1B0GX78 115 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 UBXN8O00124 270 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 CCL21O00585 134 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 PCDH17O14917 1159 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 DLX3O60479 287 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms