RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 OR9A1PQ8NGU1 263 aa7.72□□□□□ -1.17
RIF1-211ENST00000494333 HMGCLL1Q8TB92 370 aa7.72□□□□□ -1.17
RIF1-211ENST00000494333 PROKR1Q8TCW9 393 aa7.72□□□□□ -1.17
RIF1-211ENST00000494333 ANP32BQ92688 251 aaKnown RBP7.72□□□□□ -1.17
RIF1-211ENST00000494333 PTERQ96BW5 349 aa7.72□□□□□ -1.17
RIF1-211ENST00000494333 LCORQ96JN0 433 aaPredicted RBP7.72□□□□□ -1.17
RIF1-211ENST00000494333 ACAT2Q9BWD1 397 aa7.72□□□□□ -1.17
RIF1-211ENST00000494333 DDX47Q9H0S4 455 aaKnown RBP7.72□□□□□ -1.17
RIF1-211ENST00000494333 CCDC68Q9H2F9 335 aa7.72□□□□□ -1.17
RIF1-211ENST00000494333 POFUT1Q9H488 388 aa7.72□□□□□ -1.17
RIF1-211ENST00000494333 ZCCHC4Q9H5U6 513 aa7.72□□□□□ -1.17
RIF1-211ENST00000494333 ASIC3Q9UHC3 531 aa7.72□□□□□ -1.17
RIF1-211ENST00000494333 FBXO5Q9UKT4 447 aa7.72□□□□□ -1.17
RIF1-211ENST00000494333 PADI2Q9Y2J8 665 aa7.72□□□□□ -1.17
RIF1-211ENST00000494333 PTRH2Q9Y3E5 179 aaKnown RBP7.72□□□□□ -1.17
RIF1-211ENST00000494333 PCDHGA9Q9Y5G4 932 aaKnown RBP7.72□□□□□ -1.17
RIF1-211ENST00000494333 KALRNO60229 2985 aa7.71□□□□□ -1.17
RIF1-211ENST00000494333 A0A0J9YVX5 310 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 A0A1B0GX78 115 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 A0A1W2PPV9 198 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 USP27XA6NNY8 438 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 ARHGEF33A8MVX0 844 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 ZBTB14O43829 449 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 SRPX2O60687 465 aaPredicted RBP7.71□□□□□ -1.18
RIF1-211ENST00000494333 CTSVO60911 334 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 SYF2O95926 243 aaKnown RBP7.71□□□□□ -1.18
RIF1-211ENST00000494333 CATP04040 527 aaKnown RBP7.71□□□□□ -1.18
RIF1-211ENST00000494333 EIF2S1P05198 315 aaKnown RBP7.71□□□□□ -1.18
RIF1-211ENST00000494333 ERVK-10P10266 1014 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 CPEP16870 476 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 TCP1P17987 556 aaKnown RBP7.71□□□□□ -1.18
RIF1-211ENST00000494333 MCM3P25205 808 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 CMPK1P30085 196 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 FOLR3P41439 243 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 SLC1A2P43004 574 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 PGDP52209 483 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 RRADP55042 308 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 MLLT10P55197 1068 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 FOXL2P58012 376 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 VSX2P58304 361 aaPredicted RBP7.71□□□□□ -1.18
RIF1-211ENST00000494333 GNG11P61952 73 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 MPP1Q00013 466 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 CUL1Q13616 776 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 ATP1A4Q13733 1029 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 GRM7Q14831 915 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 CYP2A13Q16696 494 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 FAM214AQ32MH5 1076 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 TTLL9Q3SXZ7 439 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.71□□□□□ -1.18
RIF1-211ENST00000494333 WASHC2DQ5SRD0 308 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 PRAMEF9Q5VWM5 478 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 FRMPD2BQ6IN97 320 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 FBXO42Q6P3S6 717 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 ZNF549Q6P9A3 640 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 LHFPL2Q6ZUX7 228 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 MED25Q71SY5 747 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 PCGF5Q86SE9 256 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 KCNMB4Q86W47 210 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 RAB43Q86YS6 212 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 KLHL7Q8IXQ5 586 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 LMNTD2Q8IXW0 634 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 KLHL36Q8N4N3 616 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 TTC29Q8NA56 475 aaPredicted RBP7.71□□□□□ -1.18
RIF1-211ENST00000494333 FDCSPQ8NFU4 85 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 KCNJ9Q92806 393 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 INPP5DQ92835 1189 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 MBD6Q96DN6 1003 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 CAPZA3Q96KX2 299 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 PKP4Q99569 1192 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 SELENOSQ9BQE4 189 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 DPH7Q9BTV6 452 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 BARX1Q9HBU1 254 aaPredicted RBP7.71□□□□□ -1.18
RIF1-211ENST00000494333 MLXIPLQ9NP71 852 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 FAM114A2Q9NRY5 505 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 SLC22A11Q9NSA0 550 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 IARS2Q9NSE4 1012 aaKnown RBP7.71□□□□□ -1.18
RIF1-211ENST00000494333 CUTCQ9NTM9 273 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 SPATA7Q9P0W8 599 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 PCYOX1Q9UHG3 505 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 G3BP2Q9UN86 482 aaKnown RBP7.71□□□□□ -1.18
RIF1-211ENST00000494333 MED16Q9Y2X0 877 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 DHRS7Q9Y394 339 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 PIKFYVEQ9Y2I7 2098 aa7.71□□□□□ -1.18
RIF1-211ENST00000494333 LOC105369274A0A096LPK9 316 aa7.7□□□□□ -1.18
RIF1-211ENST00000494333 LOC102723532A0A0G2JNH3 316 aa7.7□□□□□ -1.18
RIF1-211ENST00000494333 HYKKA2RU49 373 aa7.7□□□□□ -1.18
RIF1-211ENST00000494333 MYO1CO00159 1063 aa7.7□□□□□ -1.18
RIF1-211ENST00000494333 PEX12O00623 359 aa7.7□□□□□ -1.18
RIF1-211ENST00000494333 DNALI1O14645 258 aaPredicted RBP7.7□□□□□ -1.18
RIF1-211ENST00000494333 DSCR3O14972 297 aa7.7□□□□□ -1.18
RIF1-211ENST00000494333 NRP2O60462 931 aa7.7□□□□□ -1.18
RIF1-211ENST00000494333 CNOT3O75175 753 aaKnown RBP7.7□□□□□ -1.18
RIF1-211ENST00000494333 BANF1O75531 89 aa7.7□□□□□ -1.18
RIF1-211ENST00000494333 CEACAM4O75871 244 aa7.7□□□□□ -1.18
RIF1-211ENST00000494333 SLC16A8O95907 504 aa7.7□□□□□ -1.18
RIF1-211ENST00000494333 MPC1LP0DKB6 136 aa7.7□□□□□ -1.18
RIF1-211ENST00000494333 PIM1P11309 404 aaPredicted RBP7.7□□□□□ -1.18
RIF1-211ENST00000494333 PGAM1P18669 254 aa7.7□□□□□ -1.18
RIF1-211ENST00000494333 IVDP26440 423 aa7.7□□□□□ -1.18
RIF1-211ENST00000494333 RPA3P35244 121 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms