RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 OTOAQ7RTW8 1153 aa5.03□□□□□ -1.6
SMG7-208ENST00000493609 C5orf24Q7Z6I8 188 aa5.03□□□□□ -1.6
SMG7-208ENST00000493609 PHLDB2Q86SQ0 1253 aa5.03□□□□□ -1.6
SMG7-208ENST00000493609 HOOK3Q86VS8 718 aa5.03□□□□□ -1.6
SMG7-208ENST00000493609 C4orf19Q8IY42 314 aa5.03□□□□□ -1.6
SMG7-208ENST00000493609 TCEANCQ8N8B7 351 aa5.03□□□□□ -1.6
SMG7-208ENST00000493609 ATAD1Q8NBU5 361 aa5.03□□□□□ -1.6
SMG7-208ENST00000493609 MAPK15Q8TD08 544 aa5.03□□□□□ -1.6
SMG7-208ENST00000493609 ZNRF4Q8WWF5 429 aa5.03□□□□□ -1.6
SMG7-208ENST00000493609 NXPE2Q96DL1 559 aa5.03□□□□□ -1.6
SMG7-208ENST00000493609 FAM218AQ96MZ4 157 aa5.03□□□□□ -1.6
SMG7-208ENST00000493609 ALKBH7Q9BT30 221 aaPredicted RBP5.03□□□□□ -1.6
SMG7-208ENST00000493609 MLPHQ9BV36 600 aaPredicted RBP5.03□□□□□ -1.6
SMG7-208ENST00000493609 IARS2Q9NSE4 1012 aaKnown RBP5.03□□□□□ -1.6
SMG7-208ENST00000493609 PANK4Q9NVE7 773 aa5.03□□□□□ -1.6
SMG7-208ENST00000493609 HACD3Q9P035 362 aa5.03□□□□□ -1.6
SMG7-208ENST00000493609 IL36AQ9UHA7 158 aa5.03□□□□□ -1.6
SMG7-208ENST00000493609 EXOGQ9Y2C4 368 aaKnown RBP5.03□□□□□ -1.6
SMG7-208ENST00000493609 NSG2Q9Y328 171 aa5.03□□□□□ -1.6
SMG7-208ENST00000493609 HBS1LQ9Y450 684 aaKnown RBP5.03□□□□□ -1.6
SMG7-208ENST00000493609 USP32Q8NFA0 1604 aa5.03□□□□□ -1.6
SMG7-208ENST00000493609 ALKQ9UM73 1620 aa5.03□□□□□ -1.6
SMG7-208ENST00000493609 MYH15Q9Y2K3 1946 aa5.03□□□□□ -1.6
SMG7-208ENST00000493609 EIF3AQ14152 1382 aaKnown RBP5.03□□□□□ -1.6
SMG7-208ENST00000493609 PIK3R4Q99570 1358 aa5.03□□□□□ -1.6
SMG7-208ENST00000493609 QRICH2Q9H0J4 1663 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 CTDSPLO15194 276 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 NXPH2O95156 264 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 MMP12P39900 470 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 CLDN17P56750 224 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 OR1D5P58170 312 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 GUCY2DQ02846 1103 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 DRP2Q13474 957 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 TRA2AQ13595 282 aaKnown RBP eCLIP5.02□□□□□ -1.61
SMG7-208ENST00000493609 ZNF542PQ5EBM4 170 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 GBP6Q6ZN66 633 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 PRUNE1Q86TP1 453 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 MEX3DQ86XN8 651 aaKnown RBP5.02□□□□□ -1.61
SMG7-208ENST00000493609 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.02□□□□□ -1.61
SMG7-208ENST00000493609 GRK7Q8WTQ7 553 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 ATP6V1E2Q96A05 226 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 LSG1Q9H089 658 aaKnown RBP5.02□□□□□ -1.61
SMG7-208ENST00000493609 COPS7BQ9H9Q2 264 aaPredicted RBP5.02□□□□□ -1.61
SMG7-208ENST00000493609 SPHK2Q9NRA0 654 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 BARHL2Q9NY43 387 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 PILRBQ9UKJ0 227 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 ELF5Q9UKW6 265 aaPredicted RBP5.02□□□□□ -1.61
SMG7-208ENST00000493609 CDH7Q9ULB5 785 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 AGTPBP1Q9UPW5 1226 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 PTCH1Q13635 1447 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 ROCK2O75116 1388 aaKnown RBP5.02□□□□□ -1.61
SMG7-208ENST00000493609 TMEM2Q9UHN6 1383 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 PLEKHG1Q9ULL1 1385 aa5.02□□□□□ -1.61
SMG7-208ENST00000493609 FAM135BQ49AJ0 1406 aa5.01□□□□□ -1.61
SMG7-208ENST00000493609 OOEPA6NGQ2 149 aa5.01□□□□□ -1.61
SMG7-208ENST00000493609 NPIPA3F8WFD2 350 aa5.01□□□□□ -1.61
SMG7-208ENST00000493609 YES1P07947 543 aa5.01□□□□□ -1.61
SMG7-208ENST00000493609 GOT1P17174 413 aa5.01□□□□□ -1.61
SMG7-208ENST00000493609 MUTP22033 750 aa5.01□□□□□ -1.61
SMG7-208ENST00000493609 RBMS1P29558 406 aaKnown RBP5.01□□□□□ -1.61
SMG7-208ENST00000493609 CCND3P30281 292 aaPredicted RBP5.01□□□□□ -1.61
SMG7-208ENST00000493609 OR3A1P47881 315 aa5.01□□□□□ -1.61
SMG7-208ENST00000493609 YWHAHQ04917 246 aaPredicted RBP5.01□□□□□ -1.61
SMG7-208ENST00000493609 MEP1BQ16820 701 aa5.01□□□□□ -1.61
SMG7-208ENST00000493609 GPR141Q7Z602 305 aa5.01□□□□□ -1.61
SMG7-208ENST00000493609 PRSS35Q8N3Z0 413 aa5.01□□□□□ -1.61
SMG7-208ENST00000493609 TDRD1Q9BXT4 1180 aaKnown RBP5.01□□□□□ -1.61
SMG7-208ENST00000493609 C10orf88Q9H8K7 445 aa5.01□□□□□ -1.61
SMG7-208ENST00000493609 SLC12A6Q9UHW9 1150 aa5.01□□□□□ -1.61
SMG7-208ENST00000493609 NOCTQ9UK39 431 aaKnown RBP5.01□□□□□ -1.61
SMG7-208ENST00000493609 POMT2Q9UKY4 750 aa5.01□□□□□ -1.61
SMG7-208ENST00000493609 COLEC10Q9Y6Z7 277 aa5.01□□□□□ -1.61
SMG7-208ENST00000493609 USP47Q96K76 1375 aa5.01□□□□□ -1.61
SMG7-208ENST00000493609 CHD2O14647 1828 aaKnown RBP5□□□□□ -1.61
SMG7-208ENST00000493609 RIMS2Q9UQ26 1411 aa5□□□□□ -1.61
SMG7-208ENST00000493609 TOPAZ1Q8N9V7 1692 aa5□□□□□ -1.61
SMG7-208ENST00000493609 GLTPD2A6NH11 291 aa5□□□□□ -1.61
SMG7-208ENST00000493609 RTCAO00442 366 aaKnown RBP5□□□□□ -1.61
SMG7-208ENST00000493609 KIF5CO60282 957 aa5□□□□□ -1.61
SMG7-208ENST00000493609 CYTIPO60759 359 aa5□□□□□ -1.61
SMG7-208ENST00000493609 NME6O75414 186 aaPredicted RBP5□□□□□ -1.61
SMG7-208ENST00000493609 SAP30O75446 220 aa5□□□□□ -1.61
SMG7-208ENST00000493609 IGHEP01854 428 aa5□□□□□ -1.61
SMG7-208ENST00000493609 KRT2P35908 639 aa5□□□□□ -1.61
SMG7-208ENST00000493609 NPBWR1P48145 328 aa5□□□□□ -1.61
SMG7-208ENST00000493609 DUSP5Q16690 384 aa5□□□□□ -1.61
SMG7-208ENST00000493609 IQCCQ4KMZ1 466 aa5□□□□□ -1.61
SMG7-208ENST00000493609 ANKRD20A4Q4UJ75 823 aa5□□□□□ -1.61
SMG7-208ENST00000493609 ANKRD20A8PQ5CZ79 823 aa5□□□□□ -1.61
SMG7-208ENST00000493609 CCDC158Q5M9N0 1113 aa5□□□□□ -1.61
SMG7-208ENST00000493609 ANKRD20A2Q5SQ80 823 aa5□□□□□ -1.61
SMG7-208ENST00000493609 C1QTNF12Q5T7M4 302 aa5□□□□□ -1.61
SMG7-208ENST00000493609 ZC2HC1BQ5TFG8 222 aa5□□□□□ -1.61
SMG7-208ENST00000493609 ANKRD20A1Q5TYW2 823 aa5□□□□□ -1.61
SMG7-208ENST00000493609 ANKRD20A3Q5VUR7 823 aa5□□□□□ -1.61
SMG7-208ENST00000493609 ZNF770Q6IQ21 691 aaPredicted RBP5□□□□□ -1.61
SMG7-208ENST00000493609 PODNL1Q6PEZ8 512 aa5□□□□□ -1.61
SMG7-208ENST00000493609 ANKRD46Q86W74 232 aa5□□□□□ -1.61
SMG7-208ENST00000493609 TUSC5Q8IXB3 177 aa5□□□□□ -1.61
SMG7-208ENST00000493609 ZNF614Q8N883 585 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms