RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 HKDC1Q2TB90 917 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 ZNF284Q2VY69 593 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 FRMPD2BQ6IN97 320 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 MBOAT1Q6ZNC8 495 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 PRSS42Q7Z5A4 293 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 BCDIN3DQ7Z5W3 292 aaKnown RBP11.25□□□□□ -0.61
HDAC4-210ENST00000493582 PDZD3Q86UT5 571 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 SYT14Q8NB59 555 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 RIT1Q92963 219 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 DACT3Q96B18 629 aaPredicted RBP11.25□□□□□ -0.61
HDAC4-210ENST00000493582 TESCQ96BS2 214 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 MSLNLQ96KJ4 702 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 C8orf48Q96LL4 319 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 GPR137Q96N19 417 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 DPCDQ9BVM2 203 aaPredicted RBP11.25□□□□□ -0.61
HDAC4-210ENST00000493582 C1QTNF6Q9BXI9 259 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 LIN7BQ9HAP6 207 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 CLN6Q9NWW5 311 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 YARS2Q9Y2Z4 477 aaKnown RBP11.25□□□□□ -0.61
HDAC4-210ENST00000493582 MOXD2PA6NHM9 499 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 INMT-MINDY4F8WBC2 141 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 GTPBP1O00178 669 aaKnown RBP11.25□□□□□ -0.61
HDAC4-210ENST00000493582 BET1O15155 118 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 SERPINI2O75830 405 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 HOXD4P09016 255 aaPredicted RBP11.25□□□□□ -0.61
HDAC4-210ENST00000493582 KIR3DL1P43629 444 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 CLDN20P56880 219 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 ZNF235Q14590 738 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 PAN2Q504Q3 1202 aaKnown RBP11.25□□□□□ -0.61
HDAC4-210ENST00000493582 ERICH5Q6P6B1 374 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 DENND1CQ8IV53 801 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 ZNF366Q8N895 744 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 TMEM145Q8NBT3 493 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 C3orf58Q8NDZ4 430 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 OR11H4Q8NGC9 324 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 CDC26Q8NHZ8 85 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 MARVELD1Q9BSK0 173 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 NMUR1Q9HB89 426 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 CSNK1G1Q9HCP0 422 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 WWOXQ9NZC7 414 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 LSM2Q9Y333 95 aaKnown RBP11.25□□□□□ -0.61
HDAC4-210ENST00000493582 RAI2Q9Y5P3 530 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 PTCH2Q9Y6C5 1203 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 CEP350Q5VT06 3117 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 MAGEB17A8MXT2 336 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 ISM1B1AKI9 464 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 PROM1O43490 865 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 ORC5O43913 435 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 PRKAR1AP10644 381 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 ANXA8P13928 327 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 ITGB7P26010 798 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 SSTR2P30874 369 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 LHX1P48742 406 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 TEKQ02763 1124 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 LRRC32Q14392 662 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 FCN2Q15485 313 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 MICAQ29983 383 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 GARNL3Q5VVW2 1013 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 MZT2BQ6NZ67 158 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 ZNF782Q6ZMW2 699 aaPredicted RBP11.24□□□□□ -0.61
HDAC4-210ENST00000493582 DNAJC5GQ8N7S2 189 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 KCNJ9Q92806 393 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 IGSF8Q969P0 613 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 APOLD1Q96LR9 279 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 EBPLQ9BY08 206 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 CDCP1Q9H5V8 836 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 ABCC13Q9NSE7 274 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 CNOT2Q9NZN8 540 aaKnown RBP11.24□□□□□ -0.61
HDAC4-210ENST00000493582 DNAJC27Q9NZQ0 273 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 RIMKLBQ9ULI2 386 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 TPST2O60704 377 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 HLA-EP13747 358 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 PBX3P40426 434 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 MAP2K6P52564 334 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 ATN1P54259 1190 aaPredicted RBP11.24□□□□□ -0.61
HDAC4-210ENST00000493582 RHAGQ02094 409 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 CNIH2Q6PI25 160 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 LIPIQ6XZB0 460 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 GDPGP1Q6ZNW5 385 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 SCD5Q86SK9 330 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 RNF175Q8N4F7 328 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 APIPQ96GX9 242 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 PSKH2Q96QS6 385 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 COPS8Q99627 209 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 PAAF1Q9BRP4 392 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 WACQ9BTA9 647 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 DOHHQ9BU89 302 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 ZYG11BQ9C0D3 744 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 HEXA-AS1Q9H8Q6 139 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 SNX11Q9Y5W9 270 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 YY2O15391 372 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 AKAP8O43823 692 aaKnown RBP11.24□□□□□ -0.61
HDAC4-210ENST00000493582 RAF1P04049 648 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 HTR7P34969 479 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 AGFG1P52594 562 aaKnown RBP11.24□□□□□ -0.61
HDAC4-210ENST00000493582 RPA4Q13156 261 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 IL18Q14116 193 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 SNAPC1Q16533 368 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 DUOXA1Q1HG43 343 aa11.24□□□□□ -0.61
HDAC4-210ENST00000493582 XKR4Q5GH76 650 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms