RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 OR2M7Q8NG81 312 aa13.26□□□□□ -0.29
PRPF40A-211ENST00000493468 NUDT8Q8WV74 236 aa13.26□□□□□ -0.29
PRPF40A-211ENST00000493468 FAM136AQ96C01 138 aa13.26□□□□□ -0.29
PRPF40A-211ENST00000493468 PTCHD1Q96NR3 888 aa13.26□□□□□ -0.29
PRPF40A-211ENST00000493468 IL22Q9GZX6 179 aa13.26□□□□□ -0.29
PRPF40A-211ENST00000493468 CLK4Q9HAZ1 481 aaKnown RBP13.26□□□□□ -0.29
PRPF40A-211ENST00000493468 STAB1Q9NY15 2570 aa13.26□□□□□ -0.29
PRPF40A-211ENST00000493468 GALPQ9UBC7 116 aa13.26□□□□□ -0.29
PRPF40A-211ENST00000493468 CBLCQ9ULV8 474 aa13.26□□□□□ -0.29
PRPF40A-211ENST00000493468 PPIEQ9UNP9 301 aaKnown RBP13.26□□□□□ -0.29
PRPF40A-211ENST00000493468 TRBV11-1A0A0K0K1C0 115 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 E5RI56 91 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 AQP7O14520 342 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 CHST10O43529 356 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 ZBTB14O43829 449 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 GOSR1O95249 250 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 SYF2O95926 243 aaKnown RBP13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 ENO3P13929 434 aaPredicted RBP13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 OGNP20774 298 aaKnown RBP13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 GRK3P35626 688 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 SSR4P51571 173 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 CLCN7P51798 805 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 PLGLB1Q02325 96 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 KEAP1Q14145 624 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 FBXL19-AS1Q494R0 122 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 C1orf185Q5T7R7 199 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 TRILQ7L0X0 811 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 CXXC5Q7LFL8 322 aaKnown RBP13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 WDR53Q7Z5U6 358 aaPredicted RBP13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 FAM109AQ8N4B1 249 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 MFSD9Q8NBP5 474 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 ZNF740Q8NDX6 193 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 TTTY12Q9BZ98 90 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 PRDM9Q9NQV7 894 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 VPS9D1Q9Y2B5 631 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 YARS2Q9Y2Z4 477 aaKnown RBP13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 TLN2Q9Y4G6 2542 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 ATRQ13535 2644 aa13.25□□□□□ -0.29
PRPF40A-211ENST00000493468 SYCE3A1L190 88 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 PINLYPA6NC86 204 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 FAM166BA8MTA8 275 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 AKR1B15C9JRZ8 316 aaPredicted RBP13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 AP3B1O00203 1094 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 SUSD5O60279 629 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 LCMT2O60294 686 aaKnown RBP13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 B4GALT2O60909 372 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 APRTP07741 180 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 ALOX12P18054 663 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 NMBRP28336 390 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 BTG2P78543 158 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 PWP1Q13610 501 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 SPA17Q15506 151 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 OASLQ15646 514 aaKnown RBP13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 SHEQ5VZ18 495 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 GK5Q6ZS86 529 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 C17orf64Q86WR6 236 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 CCDC170Q8IYT3 715 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 PRELID2Q8N945 189 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 LRRC57Q8N9N7 239 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 ARMC2Q8NEN0 867 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 LRRC46Q96FV0 321 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 VMP1Q96GC9 406 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 SH3GL2Q99962 352 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 KIFC1Q9BW19 673 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 NEUROD4Q9HD90 331 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 EIF2B3Q9NR50 452 aaKnown RBP13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 RAB6BQ9NRW1 208 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 KCMF1Q9P0J7 381 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 FOXD3Q9UJU5 478 aaPredicted RBP13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 ERVK-11Q9UQG0 969 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 CRYL1Q9Y2S2 319 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 LIPGQ9Y5X9 500 aa13.24□□□□□ -0.29
PRPF40A-211ENST00000493468 A8MVJ9 347 aa13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 BTNL10A8MVZ5 291 aa13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 VAPBO95292 243 aa13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 GABRA1P14867 456 aa13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 MAOAP21397 527 aa13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 CCND1P24385 295 aa13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 UQCRC1P31930 480 aa13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 ASCL1P50553 236 aa13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 SESN2P58004 480 aaPredicted RBP13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 CRADDP78560 199 aa13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 SNTB1Q13884 538 aaKnown RBP13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 HYAL4Q2M3T9 481 aa13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 DEFB134Q4QY38 66 aa13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 STRA8Q7Z7C7 330 aa13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 GIMAP7Q8NHV1 300 aa13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 RNASE6Q93091 150 aaKnown RBP13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 SARAFQ96BY9 339 aa13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 SLC30A3Q99726 388 aa13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 FRMD8P1Q9BZ68 369 aaPredicted RBP13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 PLEKHF2Q9H8W4 249 aa13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 INTS10Q9NVR2 710 aaKnown RBP13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 BEX4Q9NWD9 120 aaPredicted RBP13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 HPF1Q9NWY4 346 aa13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 ZNF223Q9UK11 482 aaPredicted RBP13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 FBXW2Q9UKT8 454 aa13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 SH2B3Q9UQQ2 575 aa13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 DRG1Q9Y295 367 aaKnown RBP13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 PCDHGB3Q9Y5G1 929 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms