RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 ARRDC1-AS1Q9H2J1 176 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 TNMDQ9H2S6 317 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 ERVMER34-1Q9H9K5 563 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 SEBOXQ9HB31 216 aaPredicted RBP2.89□□□□□ -1.95
PTCD3-218ENST00000493430 OLFML3Q9NRN5 406 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 EXOC1Q9NV70 894 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 SLC38A7Q9NVC3 462 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 MARCH4Q9P2E8 410 aaPredicted RBP2.89□□□□□ -1.95
PTCD3-218ENST00000493430 ZNF69Q9UC07 566 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 FBXL2Q9UKC9 423 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 MAN1B1Q9UKM7 699 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 HSF4Q9ULV5 492 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 KIF3AQ9Y496 699 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 SNX10Q9Y5X0 201 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 CPQQ9Y646 472 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 SCINQ9Y6U3 715 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 SPTBP11277 2137 aa2.89□□□□□ -1.95
PTCD3-218ENST00000493430 GOLGA6L7A0A1B0GV03 622 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 ZNF233A6NK53 670 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 TTC36A6NLP5 189 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 A8MXQ7 604 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 RNF103O00237 685 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 TRAPPC3O43617 180 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 HUS1O60921 280 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 ZNF821O75541 412 aaPredicted RBP2.88□□□□□ -1.95
PTCD3-218ENST00000493430 KLF8O95600 359 aaPredicted RBP2.88□□□□□ -1.95
PTCD3-218ENST00000493430 OAS1P00973 400 aaKnown RBP2.88□□□□□ -1.95
PTCD3-218ENST00000493430 TNNC2P02585 160 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 HOXB5P09067 269 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 CD48P09326 243 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 COX7A2P14406 83 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 WARSP23381 471 aaKnown RBP2.88□□□□□ -1.95
PTCD3-218ENST00000493430 HOXA9P31269 272 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 IFNAR2P48551 515 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 PPM1FP49593 454 aaPredicted RBP2.88□□□□□ -1.95
PTCD3-218ENST00000493430 KLK7P49862 253 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 METAP1P53582 386 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 MLLT10P55197 1068 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 TNNC1P63316 161 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 RBP5P82980 135 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 MYL7Q01449 175 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 TSPY1Q01534 308 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 FCHO2Q0JRZ9 810 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 TAF12Q16514 161 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 GOLGA7BQ2TAP0 167 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 MYLK3Q32MK0 819 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 ZFP69Q49AA0 526 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 C6orf141Q5SZD1 244 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 TPGS2Q68CL5 300 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 C18orf63Q68DL7 685 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 MMS22LQ6ZRQ5 1243 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 CLEC20AQ6ZU45 233 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 CACNA2D4Q7Z3S7 1137 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 METTL23Q86XA0 190 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 TMEM25Q86YD3 366 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 WDR49Q8IV35 697 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 MFSD6LQ8IWD5 586 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 ELMOD1Q8N336 334 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 PAF1Q8N7H5 531 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 ANKRD42Q8N9B4 389 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 XXYLT1Q8NBI6 393 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 ACVR1CQ8NER5 493 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 FBXO32Q969P5 355 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 ZNF653Q96CK0 615 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 HVCN1Q96D96 273 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 ANKRD36BP1Q96IX9 119 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 CRACR2AQ9BSW2 395 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 TIPINQ9BVW5 301 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 TRIM15Q9C019 465 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 SNX25Q9H3E2 840 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 ST6GALNAC4Q9H4F1 302 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 ECT2Q9H8V3 914 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 PRMT8Q9NR22 394 aaPredicted RBP2.88□□□□□ -1.95
PTCD3-218ENST00000493430 ACSS1Q9NUB1 689 aaPredicted RBP2.88□□□□□ -1.95
PTCD3-218ENST00000493430 INTS10Q9NVR2 710 aaKnown RBP2.88□□□□□ -1.95
PTCD3-218ENST00000493430 DUS2Q9NX74 493 aaKnown RBP2.88□□□□□ -1.95
PTCD3-218ENST00000493430 KCND2Q9NZV8 630 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 PAK5Q9P286 719 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 SLC25A10Q9UBX3 287 aaPredicted RBP2.88□□□□□ -1.95
PTCD3-218ENST00000493430 CYTH4Q9UIA0 394 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 XPO7Q9UIA9 1087 aaKnown RBP2.88□□□□□ -1.95
PTCD3-218ENST00000493430 RASAL2Q9UJF2 1139 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 ITGA11Q9UKX5 1188 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 FRYLO94915 3013 aa2.88□□□□□ -1.95
PTCD3-218ENST00000493430 MDC1Q14676 2089 aaKnown RBP2.88□□□□□ -1.95
PTCD3-218ENST00000493430 ACACBO00763 2458 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 EML6Q6ZMW3 1958 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 SYNJ2BP-COX16A0A087WUM0 186 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 TRAV19A0A0A6YYK7 116 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 A0A0J9YWU9 116 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 A0A1W2PPI3 338 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 ZNF840PA6NDX5 716 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 USP17L23D6RBM5 183 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 NEDD8-MDP1E9PL57 170 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 K7EQS6 105 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 VCYO14598 125 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 HS3ST1O14792 307 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 CHADO15335 359 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 GRAP2O75791 330 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms