RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 SEMA3GQ9NS98 782 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 ADGRE2Q9UHX3 823 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 C3orf18Q9UK00 162 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 PCDHGA11Q9Y5H2 935 aa12.1□□□□□ -0.47
CLIP2-209ENST00000493166 A0A088AWK7 358 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 A0A0G2JN53 185 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 CCDC151A5D8V7 595 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 IDSB3KWA1 339 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 C4orf51C9J302 202 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 H0YIV9 168 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 PLIN3O60664 434 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 SUPT7LO94864 414 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 BMP10O95393 424 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 OTCP00480 354 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 PROCP04070 461 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 HEXBP07686 556 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 SMIM10L1P0DMW3 83 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 TSPAN8P19075 237 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 ZNF10P21506 573 aaPredicted RBP12.09□□□□□ -0.47
CLIP2-209ENST00000493166 XCR1P46094 333 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 PLA2G16P53816 162 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 PRKAA2P54646 552 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 EMP2P54851 167 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 RRADP55042 308 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 OLR1P78380 273 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 BTN3A2P78410 334 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 PHEXP78562 749 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 TGM3Q08188 693 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 CHAF1BQ13112 559 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 TRAF3Q13114 568 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 ZNF678Q5SXM1 525 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 CPZQ66K79 652 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 PCSK4Q6UW60 755 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 ZYG11AQ6WRX3 759 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 LAPTM4BQ86VI4 370 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 APLFQ8IW19 511 aaPredicted RBP12.09□□□□□ -0.47
CLIP2-209ENST00000493166 L3MBTL4Q8NA19 623 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 OR2L5Q8NG80 312 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 OR5T3Q8NGG3 340 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 RDH11Q8TC12 318 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 ZNF473Q8WTR7 871 aaKnown RBP12.09□□□□□ -0.47
CLIP2-209ENST00000493166 NACC2Q96BF6 587 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 PEX11GQ96HA9 241 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 SMIM10Q96HG1 83 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 VPS50Q96JG6 964 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 ZIM3Q96PE6 472 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 CDK15Q96Q40 435 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 NTMT1Q9BV86 223 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 MS4A8Q9BY19 250 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 RBCK1Q9BYM8 510 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 ING2Q9H160 280 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 COPS7BQ9H9Q2 264 aaPredicted RBP12.09□□□□□ -0.47
CLIP2-209ENST00000493166 ZBTB26Q9HCK0 441 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 ACSS2Q9NR19 701 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 MKS1Q9NXB0 559 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 MKL2Q9ULH7 1088 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 RNF11Q9Y3C5 154 aa12.09□□□□□ -0.47
CLIP2-209ENST00000493166 G3V2L1 256 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 AGPSO00116 658 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 RGS16O15492 202 aaPredicted RBP12.08□□□□□ -0.48
CLIP2-209ENST00000493166 CHST10O43529 356 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 JRKO75564 520 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 TBX6O95947 436 aaPredicted RBP12.08□□□□□ -0.48
CLIP2-209ENST00000493166 TGFB1P01137 390 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 IMPDH1P20839 514 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 IL10P22301 178 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 PIK3CBP42338 1070 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 CDH13P55290 713 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 CLCQ05315 142 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 KCNAB2Q13303 367 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 LY6DQ14210 128 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 ZRSR2Q15696 482 aaKnown RBP12.08□□□□□ -0.48
CLIP2-209ENST00000493166 ADPRMQ3LIE5 342 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 MINDY4Q4G0A6 757 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 TMEM35AQ53FP2 167 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 UNC50Q53HI1 259 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 CEP85LQ5SZL2 805 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 TTC19Q6DKK2 380 aaPredicted RBP12.08□□□□□ -0.48
CLIP2-209ENST00000493166 MED25Q71SY5 747 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 MILR1Q7Z6M3 343 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 RNF175Q8N4F7 328 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 TMEM102Q8N9M5 508 aaPredicted RBP12.08□□□□□ -0.48
CLIP2-209ENST00000493166 LSM14AQ8ND56 463 aaKnown RBP12.08□□□□□ -0.48
CLIP2-209ENST00000493166 SRFBP1Q8NEF9 429 aaKnown RBP12.08□□□□□ -0.48
CLIP2-209ENST00000493166 OR4F6Q8NGB9 312 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 HUS1BQ8NHY5 278 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 TRPC4APQ8TEL6 797 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 L3HYPDHQ96EM0 354 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 CMTM7Q96FZ5 175 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 MAGEB10Q96LZ2 347 aaPredicted RBP12.08□□□□□ -0.48
CLIP2-209ENST00000493166 FER1L6-AS2Q96M78 137 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 BBC3Q96PG8 261 aaPredicted RBP12.08□□□□□ -0.48
CLIP2-209ENST00000493166 KCNC2Q96PR1 638 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 OR1F2PQ96R84 312 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 F2RL3Q96RI0 385 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 SMC6Q96SB8 1091 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 MTERF1Q99551 399 aaKnown RBP12.08□□□□□ -0.48
CLIP2-209ENST00000493166 ADNPQ9H2P0 1102 aa12.08□□□□□ -0.48
CLIP2-209ENST00000493166 C12orf65Q9H3J6 166 aaKnown RBP12.08□□□□□ -0.48
CLIP2-209ENST00000493166 CLK4Q9HAZ1 481 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms