RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	TRPC1	P48995	793 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	NR2C2	P49116	596 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	DNASE1L1	P49184	302 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	GZMK	P49863	264 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	DIO3	P55073	304 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	NAP1L1	P55209	391 aa	Known RBP	4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	TAS2R40	P59535	323 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	GBE1	Q04446	702 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	GALNT2	Q10471	571 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	SLC10A2	Q12908	348 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	ZBTB17	Q13105	803 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	PRPSAP1	Q14558	356 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	ZNF750	Q32MQ0	723 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	P3H1	Q32P28	736 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	ZNF658B	Q4V348	819 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	RNF187	Q5TA31	235 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	NCBP2-AS2	Q69YL0	99 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	LYPD8	Q6UX82	237 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	GLT6D1	Q7Z4J2	308 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	NIPA2	Q8N8Q9	360 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	C9orf106	Q8NAJ2	232 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	PLPP5	Q8NEB5	264 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	SEMA6D	Q8NFY4	1073 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	NEIL3	Q8TAT5	605 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	MCOLN3	Q8TDD5	553 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	BLOC1S5	Q8TDH9	187 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	AKAP1	Q92667	903 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	FATE1	Q969F0	183 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	HAUS1	Q96CS2	278 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	NAP1L5	Q96NT1	182 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	TSGA13	Q96PP4	275 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	FAM111A	Q96PZ2	611 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	COPS8	Q99627	209 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	ZNF670	Q9BS34	389 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	ZNF747	Q9BV97	191 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	SFXN3	Q9BWM7	321 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	RBCK1	Q9BYM8	510 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	SLC6A15	Q9H2J7	730 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	TRABD	Q9H4I3	376 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	MANSC1	Q9H8J5	431 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	BARX1	Q9HBU1	254 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	SEMA4B	Q9NPR2	832 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	TUBA8	Q9NY65	449 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	SLC39A10	Q9ULF5	831 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	PCDHA13	Q9Y5I0	950 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	HEY1	Q9Y5J3	304 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	EML6	Q6ZMW3	1958 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602	MALRD1	Q5VYJ5	2156 aa		4.94	□□□□□ -1.62
SEC13-219	ENST00000492602		A0A0A6YYJ9	748 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	TRBV11-1	A0A0K0K1C0	115 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	LRRD1	A4D1F6	860 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	CD8B2	A6NJW9	211 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	MAGEB17	A8MXT2	336 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	GOLGA6L6	A8MZA4	724 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	SLCO1B7	G3V0H7	640 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602		H0YIG0	161 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	KCNK1	O00180	336 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	LIN7A	O14910	233 aa	Predicted RBP	4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	STX7	O15400	261 aa	Known RBP	4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	SPOP	O43791	374 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	B4GALT2	O60909	372 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	PROSC	O94903	275 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	OR6B1	O95007	311 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	FKBP9	O95302	570 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	GAS8	O95995	478 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	CLCN2	P51788	898 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	SNRPN	P63162	240 aa	Known RBP	4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	LSM11	P83369	360 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	MPP1	Q00013	466 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	RHAG	Q02094	409 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	FAP	Q12884	760 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	HYAL2	Q12891	473 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	FAM53B	Q14153	422 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	DPYSL3	Q14195	570 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	PAFAH1B3	Q15102	231 aa	Known RBP	4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	SLC18A3	Q16572	532 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	NDUFA9	Q16795	377 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	CR1L	Q2VPA4	569 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	BEX5	Q5H9J7	111 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	CLEC2A	Q6UVW9	174 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	NPNT	Q6UXI9	565 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	MILR1	Q7Z6M3	343 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	VSIG1	Q86XK7	387 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	RFX6	Q8HWS3	928 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	CNGA4	Q8IV77	575 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	GPALPP1	Q8IXQ4	340 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	PM20D2	Q8IYS1	436 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	RCOR2	Q8IZ40	523 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	ARMC10	Q8N2F6	343 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	ARHGEF39	Q8N4T4	335 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	SLC25A41	Q8N5S1	370 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	CNTD1	Q8N815	330 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	OR2L3	Q8NG85	312 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	OR10H5	Q8NGA6	315 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	OR2L8	Q8NGY9	312 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	SPATA22	Q8NHS9	363 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	FAM216A	Q8WUB2	273 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	ASB15	Q8WXK1	588 aa		4.93	□□□□□ -1.62

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